[2026-05-27T11:33:29.209072Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:29.210060Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:29.210082Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:29.210089Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:29.210096Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXMKbaQv'
[2026-05-27T11:33:29.210102Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:29.210110Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:29.210116Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:29.210121Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] memMb: 1015785
[2026-05-27T11:33:29.210127Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:29.210133Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:29.210139Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:29.210144Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:29.210150Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:29.211075Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:29.211138Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:29.219215Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:29.220304Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:29.220615Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:29.221143Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:29.221392Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.222018Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.222967Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.223182Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.223367Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.223643Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.223955Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.224470Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.224600Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.226971Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.227577Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:29.228029Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.228885Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.229001Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.229165Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.229257Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.229591Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.229949Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.230115Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.230200Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.230458Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.230547Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.230698Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.230787Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.231019Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.231597Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.231805Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.231905Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.232062Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.232166Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.232328Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.232495Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.232946Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.233391Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.233575Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.233671Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.233829Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.233919Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.234074Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.234161Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.234333Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.234536Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.235142Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.235665Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.236464Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.237032Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.237685Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.237895Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.238063Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.238158Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.238308Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.238398Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.238551Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.238760Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.239090Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.239922Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.240864Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.240977Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.241140Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.241232Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.241391Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.241479Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.241636Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.241885Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.242650Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.242752Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.242910Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.242999Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.243156Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.243249Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.243398Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.243489Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.243915Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.244722Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.246821Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.246967Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.247143Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.247319Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.247735Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.248637Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.248845Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.248945Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.249108Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.249196Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.249349Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.249442Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.249815Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.250699Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.250868Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.250957Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.251116Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.251207Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.251359Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.251448Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.251608Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.251809Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.253279Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.253851Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.254771Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.254868Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.255166Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.255274Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.255434Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.255524Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.255983Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.257176Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.257365Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.257682Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.259027Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.259231Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.259684Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.259931Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.260175Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.262074Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.264108Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.264943Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.266176Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.266463Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.267047Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.268226Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.270476Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.271628Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:29.274167Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.276829Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:29.277663Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:29.277964Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.281777Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:29.290218Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:29.303646Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.307757Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.310626Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:29.310737Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.313324Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:29.314819Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.315917Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.316244Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.317448Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.318062Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.319197Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:29.319441Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:29.385942Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.387298Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.391597Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:29.397800Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:29.404482Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.405914Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.409889Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:30.675191Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.676583Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.680095Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:30.792257Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.793786Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.797252Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:31.008986Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.010438Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.014034Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:31.326032Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.326126Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.327444Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.328041Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.331864Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:31.333003Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:31.394816Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.397166Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.399724Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.400724Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:31.402740Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.404996Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.406025Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:31.407736Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.410996Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:31.439864Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.442021Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.445180Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:31.474292Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.476675Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.480205Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:31.541234Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.543728Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.547465Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:31.808795Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.811006Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.814332Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:31.875580Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.877774Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.881615Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:31.992555Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.994713Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.998077Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:32.059099Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.061191Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.064769Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:32.125791Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.128117Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.131581Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:32.192736Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.192868Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.195054Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.195770Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.199522Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:32.201007Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:32.204381Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.205642Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.209300Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:32.237953Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.240189Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.243599Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:32.304780Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.306941Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.310404Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:32.315018Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.317207Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.320402Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:32.349409Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.351514Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.355256Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:32.355800Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.357875Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.361349Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:32.472708Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.473974Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.477068Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:32.538644Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.539908Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.543199Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:32.605765Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.606985Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.610873Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:32.772511Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.773766Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.777874Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:33.390955Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.392234Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.395971Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:33.457062Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.458322Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.462006Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:33.524702Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.525977Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.529699Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:33.590987Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.592279Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.596003Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:33.706980Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.708190Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.711552Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:33.716500Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.717693Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.721043Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:33.933351Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.934564Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.937785Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:33.999005Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.000262Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.004116Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:34.065190Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.066377Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.069787Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:34.131398Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.132625Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.136048Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:34.140895Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.142086Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.145425Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:34.207510Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.208732Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.211732Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:34.273347Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.274459Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.277783Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:34.278389Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.279491Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.283334Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:34.394291Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.394403Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.395559Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.396227Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.399136Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:34.400385Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:34.463811Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.463921Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.465017Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.465819Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.469451Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:34.470722Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:34.580845Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.581949Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.585380Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:34.797429Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.798555Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.802030Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:34.864544Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.865752Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.869737Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:35.181925Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.182952Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.186369Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:35.247595Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.248694Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.252026Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:35.865650Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.866830Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.870464Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:35.931904Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.933042Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.936959Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:36.048574Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.049655Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.052995Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:36.115483Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.116559Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.119967Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:36.149091Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.150148Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.153329Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:36.158434Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.159438Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.162969Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:36.191766Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.192809Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.196648Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:36.201146Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.202173Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.205557Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:36.234622Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.235733Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.238879Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:36.300235Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.301315Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.304689Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:36.365891Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.366946Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.370523Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:36.482177Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.483196Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.486877Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:36.598686Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.599658Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.602889Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:36.664176Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.665227Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.668417Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:36.729748Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.730767Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.733608Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:36.796255Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.797248Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.800340Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:36.861884Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.862886Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.866150Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:36.927555Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.928544Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.931898Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:37.043318Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.044290Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.047526Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:37.108873Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.109826Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.112918Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:37.224346Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.225298Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.228953Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:37.340574Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.341503Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.344610Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:37.656772Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.657661Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.660948Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:37.723773Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.724688Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.727639Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:37.788841Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.789762Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.792912Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:37.904459Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.905376Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.908688Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:38.020044Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.020969Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.024020Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:38.085399Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.086301Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.089592Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:38.451674Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.451789Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.452621Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.453287Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.456026Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:38.457271Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:38.517491Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.517568Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.518341Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.520283Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.521433Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:38.523791Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:38.585326Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.586121Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.587023Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.588393Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.591858Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:38.592717Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:38.803548Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.804389Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.807339Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:38.868795Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.868904Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.869667Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.870198Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.873376Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:38.874561Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:38.934853Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.935708Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.938688Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:39.000164Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.000979Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.003820Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:39.066620Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.067399Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.070405Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:39.099774Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.100557Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.103609Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:39.104535Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.105228Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.108071Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:39.169928Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.170713Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.173717Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:39.234962Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.235690Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.238815Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:39.251868Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.252649Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.255738Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:39.284910Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.285624Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.288678Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:39.289468Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.321606Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.536189Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.536887Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.539946Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:39.601341Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.866255Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.866922Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.870158Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:39.932323Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.247223Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.247301Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.247863Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.248453Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.251085Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:40.251646Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:40.314584Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.314675Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.479152Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.479799Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.482628Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:40.512377Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.676732Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.677407Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.680172Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:40.709465Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.709828Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.709967Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.710398Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.710981Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.715396Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:40.716867Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:40.718137Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:40.744795Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.745068Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.745752Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.747412Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.749222Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:40.749660Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.750038Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:40.781756Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.781941Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.782420Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.784450Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:40.815038Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:48.236318Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:34:02.331237Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:34:02.331237Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] 
[2026-05-27T11:34:02.331237Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:34:02.331300Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] 
[2026-05-27T11:34:02.331308Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:34:02.331316Z] [nf-c722190c7ed814936bca53a5350a4eb3-618f7-b9zp8] [559_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec