cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed Sig_18_tissue_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:157000001, elapsed 0.0s, est remaining 0.7s, peak mem 115MB, user 0.1s, sys 0.7s, output queue size 4
progress 10% @chr2:72000001, elapsed 0.1s, est remaining 0.6s, peak mem 115MB, user 0.2s, sys 1.6s, output queue size 1
progress 15% @chr2:232000001, elapsed 0.1s, est remaining 0.6s, peak mem 115MB, user 0.3s, sys 2.5s, output queue size 3
progress 20% @chr3:153000001, elapsed 0.1s, est remaining 0.5s, peak mem 115MB, user 0.3s, sys 3.5s, output queue size 1
progress 25% @chr4:115000001, elapsed 0.2s, est remaining 0.5s, peak mem 115MB, user 0.4s, sys 4.4s, output queue size 1
progress 30% @chr5:81000001, elapsed 0.2s, est remaining 0.5s, peak mem 115MB, user 0.4s, sys 5.3s, output queue size 5
progress 35% @chr6:65000001, elapsed 0.2s, est remaining 0.4s, peak mem 115MB, user 0.5s, sys 6.2s, output queue size 1
progress 40% @chr7:52000001, elapsed 0.3s, est remaining 0.4s, peak mem 115MB, user 0.5s, sys 7.2s, output queue size 3
progress 45% @chr8:56000001, elapsed 0.3s, est remaining 0.4s, peak mem 115MB, user 0.6s, sys 8.2s, output queue size 1
progress 50% @chr9:69000001, elapsed 0.3s, est remaining 0.3s, peak mem 115MB, user 0.7s, sys 9.1s, output queue size 4
progress 55% @chr10:95000001, elapsed 0.4s, est remaining 0.3s, peak mem 115MB, user 0.7s, sys 10.1s, output queue size 1
progress 60% @chr11:123000001, elapsed 0.4s, est remaining 0.3s, peak mem 115MB, user 0.8s, sys 11.1s, output queue size 2
progress 65% @chr13:14000001, elapsed 0.4s, est remaining 0.2s, peak mem 115MB, user 0.8s, sys 12.0s, output queue size 2
progress 70% @chr14:60000001, elapsed 0.5s, est remaining 0.2s, peak mem 115MB, user 0.9s, sys 13.1s, output queue size 15
progress 75% @chr16:13000001, elapsed 0.5s, est remaining 0.2s, peak mem 115MB, user 1.0s, sys 14.0s, output queue size 1
progress 80% @chr17:82000001, elapsed 0.5s, est remaining 0.1s, peak mem 115MB, user 1.0s, sys 15.0s, output queue size 2
progress 85% @chr20:21000001, elapsed 0.6s, est remaining 0.1s, peak mem 115MB, user 1.1s, sys 15.9s, output queue size 1
progress 90% @chrX:31000001, elapsed 0.6s, est remaining 0.1s, peak mem 156MB, user 1.5s, sys 16.4s, output queue size 114
progress 95% @chrY:40000001, elapsed 0.7s, est remaining 0.0s, peak mem 173MB, user 2.0s, sys 16.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.5s, est remaining 0.0s, peak mem 188MB, user 5.1s, sys 17.4s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000606a6
  features: 1f8bfbff fffa320b
  extended: f1bf07ab 00407f5a
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) Platinum 8375C CPU @ 2.90GHz
threads: 31 max 128
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50044781
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.682 user 8.711 sys 10.746 real
done: 1 calls 0.002 user 0.000 sys 0.012 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.000 sys 1.508 real
idle: 72 calls 0.015 user 0.033 sys 54.296 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 198561792 mem 5.635 user 18.054 sys 3.074 real