File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/9e246a3fb8dd6fa5e74fb1879aa943/.command.err
Size
68.3 KB
Attempt
[2026-05-27T11:33:32.154563Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:32.155554Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:32.155577Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:32.155584Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:32.155591Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXYCZmO6'
[2026-05-27T11:33:32.155597Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:32.155605Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:32.155611Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:32.155618Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T11:33:32.155623Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:32.155629Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:32.155635Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:32.155641Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:32.155648Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:32.156302Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:32.156414Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:32.162196Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:32.162926Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:32.163109Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:32.163404Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:32.163745Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.164489Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.164588Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.164662Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.164828Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.164996Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.165419Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.165547Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.165718Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.165850Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.165917Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.166040Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.166593Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.168415Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.169039Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.169184Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:32.169524Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.169604Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.169721Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.169787Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.169982Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.170071Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.170443Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.170696Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.170822Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.170885Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171009Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171074Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171183Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171248Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171359Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171439Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171574Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171636Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.171891Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.172534Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.172757Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.172841Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.172998Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.173080Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.173216Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.173342Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.173912Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.173985Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174094Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174157Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174283Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174347Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174525Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174601Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174715Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174823Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.174965Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.175152Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.175516Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.175979Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.176489Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.176554Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.176662Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.176727Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.176841Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.176903Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177014Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177077Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177185Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177251Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177359Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177426Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177678Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.177811Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.178695Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.179750Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.179931Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.180008Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197166Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197296Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197386Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197588Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197664Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197750Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197836Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.198113Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.198740Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:32.198794Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:32.204370Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.205030Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.205352Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.205674Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.206193Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.206730Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.207726Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.208773Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.209609Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.211838Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-05-27T11:33:32.217695Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0002] Task initiated on local node
[2026-05-27T11:33:32.220150Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-05-27T11:33:32.220705Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-05-27T11:33:32.224171Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0009] Task initiated on local node
[2026-05-27T11:33:32.226831Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-05-27T11:33:32.227427Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-05-27T11:33:32.308746Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-05-27T11:33:32.326252Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.326333Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.327216Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.327487Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.330967Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0005] Task initiated on local node
[2026-05-27T11:33:32.332037Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-05-27T11:33:33.696689Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.698212Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.701210Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-05-27T11:33:33.762835Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.763090Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.764482Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.764867Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.769044Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0004] Task initiated on local node
[2026-05-27T11:33:33.770184Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-05-27T11:33:33.831500Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.831622Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.832622Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.832979Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.836651Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-05-27T11:33:33.837684Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0010] Task initiated on local node
[2026-05-27T11:33:33.897846Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.898859Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.902222Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-05-27T11:33:34.214411Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.215674Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.216042Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.218911Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.219417Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:34.222042Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0002] Task initiated on local node
[2026-05-27T11:33:34.251117Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.252007Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.255275Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0001] Task initiated on local node
[2026-05-27T11:33:34.284224Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.285242Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.288253Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-05-27T11:33:34.349742Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.350807Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.354548Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-05-27T11:33:34.516155Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.517295Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.520605Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0006] Task initiated on local node
[2026-05-27T11:33:34.982707Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.983713Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.986737Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0004] Task initiated on local node
[2026-05-27T11:33:35.047918Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.049088Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.052364Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-05-27T11:33:35.264035Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.264156Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.265305Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.265893Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.269277Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-05-27T11:33:35.270616Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0011] Task initiated on local node
[2026-05-27T11:33:35.380505Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.381458Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.384264Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0007] Task initiated on local node
[2026-05-27T11:33:35.746598Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.747442Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.750509Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0005] Task initiated on local node
[2026-05-27T11:33:35.811808Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.813028Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.816352Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-05-27T11:33:35.877542Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.878470Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.881766Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0000] Task initiated on local node
[2026-05-27T11:33:35.993664Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.994580Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.997536Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-05-27T11:33:36.059581Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.060553Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.063558Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-05-27T11:33:36.125127Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.126024Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.129753Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-05-27T11:33:36.391751Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.392666Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.396457Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0001] Task initiated on local node
[2026-05-27T11:33:36.457341Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.458241Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.461660Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-05-27T11:33:36.522977Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.523784Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.527257Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-05-27T11:33:36.638944Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.639854Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.643064Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-05-27T11:33:36.704710Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.707458Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.707802Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.710180Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.710643Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-05-27T11:33:36.713192Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-05-27T11:33:36.742687Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.743557Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.747069Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-05-27T11:33:36.858618Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.859449Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.863263Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0007] Task initiated on local node
[2026-05-27T11:33:36.924249Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.925158Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.928575Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0003] Task initiated on local node
[2026-05-27T11:33:37.140396Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.141261Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.144906Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:37.206121Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.206920Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.210250Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-05-27T11:33:37.271742Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.272606Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.276010Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-05-27T11:33:37.537873Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.538706Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.542256Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0006] Task initiated on local node
[2026-05-27T11:33:37.603316Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.604049Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.607137Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-05-27T11:33:37.668544Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.669225Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.672167Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0010] Task initiated on local node
[2026-05-27T11:33:37.733783Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.734725Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.737939Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0008] Task initiated on local node
[2026-05-27T11:33:37.849365Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.849996Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.853018Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-05-27T11:33:37.914331Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.915018Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.918358Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-05-27T11:33:37.979817Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.980648Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.983632Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0003] Task initiated on local node
[2026-05-27T11:33:37.996672Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.997297Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.000343Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-05-27T11:33:38.029936Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.030038Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.030689Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.031022Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.034427Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-05-27T11:33:38.036768Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-05-27T11:33:38.063215Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.063956Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.067133Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-05-27T11:33:38.067867Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.068313Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.070908Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0011] Task initiated on local node
[2026-05-27T11:33:38.132452Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.132563Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.133180Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.133463Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.137239Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-05-27T11:33:38.138281Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-05-27T11:33:38.199508Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.199615Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.200223Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.200542Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.203750Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-05-27T11:33:38.204822Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-05-27T11:33:38.264875Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.264999Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.265859Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.266208Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.269855Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0009] Task initiated on local node
[2026-05-27T11:33:38.270960Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-05-27T11:33:38.331027Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.331783Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.334882Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_009_chr10_0000] Task initiated on local node
[2026-05-27T11:33:38.396113Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.396933Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.399959Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-05-27T11:33:38.461302Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.462341Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.465743Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-05-27T11:33:38.526880Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.741575Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.742204Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.745384Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-05-27T11:33:38.774404Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.838786Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.839455Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.842067Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-05-27T11:33:38.847221Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.847865Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.850667Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0008] Task initiated on local node
[2026-05-27T11:33:38.879972Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.883826Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.148665Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.149207Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.151941Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0000] Task initiated on local node
[2026-05-27T11:33:39.213377Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.327732Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.328219Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.331074Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-05-27T11:33:39.360435Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.725382Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.725903Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.728888Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-05-27T11:33:39.758019Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.790060Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.790484Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.793000Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-05-27T11:33:39.822575Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.822864Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.823009Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.823279Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.823587Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.828523Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:39.828791Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:39.829598Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:39.856231Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.856307Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.856331Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.856553Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.856836Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.859992Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:39.860190Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:39.888901Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.888979Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.889182Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.891514Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:39.921065Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.741453Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:33:51.044214Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:33:51.044214Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] 
[2026-05-27T11:33:51.044214Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:33:51.044288Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] 
[2026-05-27T11:33:51.044305Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:33:51.044312Z] [nf-ae9e246a3fb8dd6fa5e74fb1879aa943-768bf-sbx94] [600_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec