File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/9c14d9940e37844195ec564bea316f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-m5en4pn2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:06,107 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:06,901 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:07,073 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:08,087 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:08,267 - cnv_pipe.batch.run_model - INFO - Processing cluster 954 with 183 probes
2026-05-27 11:38:08,639 - cnv_pipe.batch.run_model.cluster954 - INFO - Child process started for cluster 954 with 183 probes
2026-05-27 11:39:04,272 - cnv_pipe.batch.run_model.cluster954 - INFO - Child process finished cluster 954. Wrote cluster_954_samples.csv and cluster_954_params.csv
2026-05-27 11:39:04,273 - cnv_pipe.batch.run_model - INFO - Cluster 954 finished in 56.01 seconds. Status: SUCCESS