File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/5537dcd51daa77ed34544241f301f9/.command.log
Size
710 bytes
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_GERMLINE_VC:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (germline_control_2;germline_control_2)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/5537dcd51daa77ed34544241f301f9/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/5537dcd51daa77ed34544241f301f9/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/913060702caf09fcfc1e4e7b484246/Sig_18_Blood.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/be8518f5839f2787b7e04a5b432879/germline_control_2.bed
==> STAGING COMPLETE (5 inputs)

[mpileup] 1 samples in 1 input files