File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/e3c3bdb018361e2bf64b7ada30166e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l3ov1dsh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:21,756 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:22,557 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:22,732 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:23,777 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:23,967 - cnv_pipe.batch.run_model - INFO - Processing cluster 1048 with 181 probes
2026-05-27 11:38:24,343 - cnv_pipe.batch.run_model.cluster1048 - INFO - Child process started for cluster 1048 with 181 probes
2026-05-27 11:39:20,670 - cnv_pipe.batch.run_model.cluster1048 - INFO - Child process finished cluster 1048. Wrote cluster_1048_samples.csv and cluster_1048_params.csv
2026-05-27 11:39:20,671 - cnv_pipe.batch.run_model - INFO - Cluster 1048 finished in 56.70 seconds. Status: SUCCESS