[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXn0t2rO/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXn0t2rO/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXn0t2rO/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T11:33:39.443773Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:39.450346Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:39.450374Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:39.450391Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:39.450397Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXn0t2rO'
[2026-05-27T11:33:39.450402Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:39.450408Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:39.450414Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:39.450420Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T11:33:39.450425Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:39.450431Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:39.450438Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:39.450443Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:39.450452Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:39.450825Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:39.450918Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:39.457078Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:39.457767Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:39.458080Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:39.458334Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:39.458605Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459109Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459200Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459273Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459390Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459457Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459574Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459637Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459752Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.459822Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.460266Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.460756Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.460957Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.461111Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.461232Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.461927Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.462272Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.464174Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.464543Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:39.464984Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.465798Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466030Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466157Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466228Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466345Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466412Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466563Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466630Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466741Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466808Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466917Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.466982Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.467272Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.467659Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.467786Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.467850Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.467958Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468023Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468163Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468229Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468340Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468403Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468518Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468583Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468701Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.468879Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.469457Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.469585Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.469700Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.469763Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.469899Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.469981Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.470091Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.470154Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.470262Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.470324Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.470573Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471091Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471204Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471270Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471382Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471443Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471553Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471618Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471725Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471792Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471900Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471962Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.472085Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.472266Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.473156Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.473276Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.473408Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.473482Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.474843Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.475020Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.475843Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.475923Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476039Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476122Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476239Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476304Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476419Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476481Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476592Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476661Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.476801Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.477150Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478021Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478131Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478268Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478346Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478466Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478535Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478653Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478717Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.478887Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.479896Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480116Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480201Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480402Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480470Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480588Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480654Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480767Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480838Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.480947Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.481028Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.481511Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.482204Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.485119Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.485586Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.485879Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.485959Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.494561Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.503053Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.503672Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.503886Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.504010Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.504347Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.505111Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.505277Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.505701Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.506028Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.506547Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.507076Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.508281Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.508668Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.509636Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.509971Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.510788Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.511789Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:39.514176Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.515428Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:39.520547Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:39.523945Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:39.526789Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:39.530492Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:39.534942Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:39.535355Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:39.535598Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:39.650391Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.650480Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.650512Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.651761Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.652212Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.652970Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.655540Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:39.658887Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:39.660072Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:40.471554Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.472983Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.476371Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:40.788316Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.789454Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.792622Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:40.904191Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.906162Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.909556Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:40.970602Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.970693Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.971897Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.972272Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.975984Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:40.977336Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:41.187438Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.189157Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.192569Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:41.253757Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.255402Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.258819Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:41.263688Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.265308Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.268481Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:41.329664Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.331798Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.334947Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:41.396193Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.397862Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.401006Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:41.512628Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.514614Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.517891Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:41.579230Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.581142Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.584303Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:41.846208Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.848093Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.851381Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:41.912420Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.914185Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.917562Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:42.379575Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.381346Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.384834Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:42.446067Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.447930Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.451794Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:42.663348Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.664618Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.667727Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:42.879903Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.881236Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.884432Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:43.046181Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.047427Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.050877Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:43.063849Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.065077Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.068111Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:43.129718Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.131157Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.134290Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:43.196917Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.198217Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.201188Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:43.262457Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.263803Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.266864Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:43.328301Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.329625Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.332971Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:43.345857Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.347021Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.350052Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:43.379137Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.380710Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.383795Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:43.388579Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.390033Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.392799Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:43.422073Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.422169Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.423288Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.423559Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.427309Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:43.428090Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.428504Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:43.429424Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.432244Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:43.494030Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.495173Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.498263Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:43.559631Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.560929Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.563856Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:43.625467Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.625573Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.626585Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.626927Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.630357Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:43.631232Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:43.659229Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.660503Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.661313Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.661522Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.664183Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.664422Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:43.664784Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.668447Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:43.669426Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:43.729545Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.731097Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.731578Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.734001Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.734675Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:43.737381Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:43.766446Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.767849Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.768149Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.770976Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.771193Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:43.774113Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:43.803413Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.804507Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.807685Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:43.836958Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.838004Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.841790Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:43.870504Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.871615Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.874787Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:43.936349Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.937427Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.940656Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:44.002068Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.003156Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.006538Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:44.117914Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.118865Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.121791Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:44.183363Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.184476Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.187517Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:44.248783Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.249828Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.253219Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:44.666200Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.667111Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.669974Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:44.731373Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.731468Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.731517Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.732498Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.734401Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.735279Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:44.735623Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.738981Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:44.739897Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:44.768343Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.769928Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.770313Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.773471Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.773873Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:44.776578Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:44.805840Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.805947Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.807411Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.807759Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.808208Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.811616Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.812961Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:44.813902Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:44.815930Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.817144Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.817347Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:44.819808Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:44.849348Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.849431Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.850894Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.851321Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.854359Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:44.855455Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:44.855724Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.856758Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.859573Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:44.888929Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.889034Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.890148Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.890719Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.893826Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:44.894635Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:44.955151Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.956555Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.959968Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:45.372020Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.373145Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.376471Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:45.389350Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.390492Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.393211Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:45.406437Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.407561Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.410548Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:45.423587Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.424570Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.427753Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:45.440505Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.441576Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.444694Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:45.505901Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.507213Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.510675Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:45.571771Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.572835Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.575940Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:45.637288Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.638476Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.641200Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:45.903214Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.904043Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.907130Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:45.968452Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.968544Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.969254Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.969565Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.972938Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:45.973837Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:46.034024Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.034841Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.038236Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:46.149986Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.150785Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.153413Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:46.214901Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.214996Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.215711Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.216050Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.219322Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:46.250379Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:46.280431Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.280523Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.281244Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.281552Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.284797Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:46.285938Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:46.346124Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.346862Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.350147Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:46.411586Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.412357Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.415078Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:46.444615Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.444740Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.445704Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.446222Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.449187Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:46.480889Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:46.511344Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.511460Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.512442Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.512930Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.515793Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:46.516848Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:46.577205Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.578084Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.580944Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:46.610128Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.611043Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.614154Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:46.675170Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.675281Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.676219Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.676651Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.679611Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:46.680751Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:46.708805Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.709826Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.712916Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:46.774344Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.774529Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.775350Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.775892Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.778956Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:46.780494Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:46.840262Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.840355Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.841142Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.843889Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:46.905493Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.070233Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.070819Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.073953Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:47.103033Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.217386Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.217973Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.220709Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:47.281955Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.282030Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.282568Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.285118Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:47.298554Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.299106Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.301927Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:47.314876Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.314949Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.315433Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.317950Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:47.331205Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.347127Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.711748Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.712308Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.714849Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:47.744270Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.744575Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.744701Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.745279Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.745634Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.749286Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:47.750376Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:47.751229Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:47.777853Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.777920Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.777944Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.778143Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.778373Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.781143Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:47.781636Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:47.811090Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.811159Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.811341Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.813789Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:47.843352Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:50.062214Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:33:58.338608Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:33:58.338608Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] 
[2026-05-27T11:33:58.338608Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:33:58.338676Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] 
[2026-05-27T11:33:58.338684Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:33:58.338692Z] [nf-284b78c3e95e998765bef9299ed23866-92f85-2knsr] [589_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec