File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/ee41af74b754583cb99e3c97dd2f61/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_sahcdvt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:12,636 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:13,429 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:13,597 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:14,521 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:14,596 - cnv_pipe.batch.run_model - INFO - Processing cluster 1054 with 124 probes
2026-05-27 11:38:15,045 - cnv_pipe.batch.run_model.cluster1054 - INFO - Child process started for cluster 1054 with 124 probes
2026-05-27 11:38:52,236 - cnv_pipe.batch.run_model.cluster1054 - INFO - Child process finished cluster 1054. Wrote cluster_1054_samples.csv and cluster_1054_params.csv
2026-05-27 11:38:52,237 - cnv_pipe.batch.run_model - INFO - Cluster 1054 finished in 37.64 seconds. Status: SUCCESS