Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/5cf4089a802ee403db71639bfcf12b/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/5cf4089a802ee403db71639bfcf12b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/913060702caf09fcfc1e4e7b484246/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/913060702caf09fcfc1e4e7b484246/Sig_18_Blood.recalibrated.bam
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-05-27T11:33:28.489196Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:28.495604Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:28.495624Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:28.495628Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:28.495632Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXNWUOGX'
[2026-05-27T11:33:28.495637Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:28.495642Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:28.495645Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:28.495649Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T11:33:28.495652Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:28.495656Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:28.495659Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:28.495663Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:28.495667Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:28.496461Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:28.496573Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:28.502333Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:28.503096Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:28.503243Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:28.503514Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:28.503800Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.504569Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.504666Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.504740Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.504872Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.505006Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.505391Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.505515Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.505605Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.505731Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.506027Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.506451Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.507724Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.508477Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.508875Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:28.508969Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509194Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509391Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509505Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509566Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509750Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509816Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509922Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.509988Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.510095Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.510156Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.510273Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.510335Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.510682Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.510909Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511017Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511091Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511200Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511261Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511370Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511434Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511542Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511603Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511713Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511774Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.511881Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.512029Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.512487Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.512577Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.512685Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.512749Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.512865Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.512976Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.513091Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.513181Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.513288Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.513351Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.513614Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514020Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514132Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514195Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514304Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514367Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514473Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514535Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514651Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514712Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514820Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514883Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.514991Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.515072Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.515282Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.515750Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.515863Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.515925Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.516031Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.516115Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.516239Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.516307Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.517570Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518115Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518236Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518308Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518421Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518484Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518595Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518656Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518770Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518830Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.518939Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.519012Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.519200Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.519768Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.519880Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.519946Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520055Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520120Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520248Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520337Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520456Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520521Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520636Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.520698Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.536243Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.536721Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.536798Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.537055Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.537126Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.537223Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.537291Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.537420Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.537486Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.537535Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:28.545760Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.546487Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.546890Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.547385Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.548891Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.549336Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T11:33:28.549742Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.550511Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.551326Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.552090Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.554259Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-05-27T11:33:28.558899Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-05-27T11:33:28.559965Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-05-27T11:33:28.563567Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-05-27T11:33:28.565244Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-05-27T11:33:28.566311Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-05-27T11:33:28.567437Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-05-27T11:33:28.669317Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.669392Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.669413Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.669437Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.670382Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.670625Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.671003Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.671588Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.675508Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-05-27T11:33:28.679106Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-05-27T11:33:28.679388Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-05-27T11:33:28.680416Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T11:33:28.738626Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.739845Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.742849Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-05-27T11:33:28.771700Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.772753Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.775322Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-05-27T11:33:28.836566Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.836634Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.837494Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.837778Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.840868Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-05-27T11:33:28.841852Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T11:33:28.870001Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.870999Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.873817Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-05-27T11:33:28.903211Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.904272Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.907560Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T11:33:28.936920Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.938230Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.941050Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-05-27T11:33:29.353563Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.353659Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.354697Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.354977Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.358124Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T11:33:29.413196Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-05-27T11:33:29.419523Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.419585Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.420600Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.420811Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.424283Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-05-27T11:33:29.425142Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-05-27T11:33:30.238399Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.239291Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.242286Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T11:33:30.271488Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.272913Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.276134Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-05-27T11:33:30.305301Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.306772Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.310151Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-05-27T11:33:30.371031Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.372383Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.375962Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-05-27T11:33:30.405074Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.406719Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.409857Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-05-27T11:33:30.470969Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.472265Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.475393Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-05-27T11:33:30.586889Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.588140Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.591241Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-05-27T11:33:30.652524Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.653945Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.657444Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-05-27T11:33:30.768683Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.768811Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.770732Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.771170Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.774603Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-05-27T11:33:30.776268Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-05-27T11:33:30.803742Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.805434Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.807653Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.808723Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-05-27T11:33:30.809241Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.812277Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:30.817245Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.818467Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.821181Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-05-27T11:33:30.882642Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.882846Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.884681Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.885017Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.885520Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.888144Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:30.890742Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-05-27T11:33:30.890812Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.893824Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-05-27T11:33:30.955055Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.955149Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.955181Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.956471Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.957001Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.957316Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.961278Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T11:33:30.962647Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-05-27T11:33:30.963680Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-05-27T11:33:31.022298Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.022392Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.023832Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.024244Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.027748Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:31.028732Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T11:33:31.090250Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.090356Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.091762Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.092510Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.095938Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-05-27T11:33:31.096869Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-05-27T11:33:31.157113Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.158747Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.162328Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-05-27T11:33:31.874878Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.876347Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.879784Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-05-27T11:33:31.909033Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.909139Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.910348Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.910582Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.910836Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.914676Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T11:33:31.915441Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.916227Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-05-27T11:33:31.918572Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-05-27T11:33:31.947934Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.948028Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.948882Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.949131Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.952027Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-05-27T11:33:31.953239Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-05-27T11:33:31.981521Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.982341Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.985435Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-05-27T11:33:31.990171Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.990802Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.993903Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T11:33:32.023015Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.023954Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.027243Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-05-27T11:33:32.056359Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.056440Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.056477Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.057607Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.057846Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.058307Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.061625Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.062402Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-05-27T11:33:32.064143Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-05-27T11:33:32.064697Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-05-27T11:33:32.065178Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.067937Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T11:33:32.097140Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.097235Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.097265Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.097980Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.098255Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.098506Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.104093Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-05-27T11:33:32.104336Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-05-27T11:33:32.105422Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-05-27T11:33:32.313943Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.314801Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.317576Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-05-27T11:33:32.347046Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.347832Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.350825Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-05-27T11:33:32.412393Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.413287Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.416911Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-05-27T11:33:32.578455Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.579278Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.582686Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-05-27T11:33:32.844656Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.845387Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.848658Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-05-27T11:33:32.909930Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.910698Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.913669Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-05-27T11:33:32.926844Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.927534Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.930542Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-05-27T11:33:32.943365Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.944112Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.947309Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-05-27T11:33:32.976418Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.977190Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.980167Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T11:33:33.041609Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.042432Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.046074Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T11:33:33.058834Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.059525Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.062352Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-05-27T11:33:33.091762Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.092561Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.095706Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-05-27T11:33:33.307451Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.308144Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.311258Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-05-27T11:33:33.372599Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.373317Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.376468Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-05-27T11:33:33.839412Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.840068Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.843163Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-05-27T11:33:34.455818Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.455909Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.456546Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.456980Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.460169Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T11:33:34.461201Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-05-27T11:33:34.521616Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.521727Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.522341Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.522699Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.526209Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-05-27T11:33:34.557166Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-05-27T11:33:34.587336Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.587419Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.588016Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.588356Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.591599Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-05-27T11:33:34.592706Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.593269Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T11:33:34.593665Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.596378Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-05-27T11:33:34.625627Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.626260Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.628238Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.628891Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.629322Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-05-27T11:33:34.631828Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-05-27T11:33:34.660965Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.661549Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.665242Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-05-27T11:33:34.677567Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.678158Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.681249Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-05-27T11:33:34.686006Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.686554Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.689250Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-05-27T11:33:34.702738Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.703382Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.706103Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-05-27T11:33:34.711096Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.711621Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.714196Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T11:33:34.720528Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.736628Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.744479Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.760485Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.761046Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.763858Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-05-27T11:33:34.793231Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.825645Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.826194Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.829141Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-05-27T11:33:34.890608Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.005068Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.005558Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.008613Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-05-27T11:33:35.037901Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.352793Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.352883Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.353373Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.353765Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.356635Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-05-27T11:33:35.357755Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-05-27T11:33:35.386224Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.386995Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.387176Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.387317Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.387595Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.388071Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.392947Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:35.394243Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:35.420488Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.420803Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.421261Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:35.423161Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.423790Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.424053Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:35.424160Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.426287Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:35.456274Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.456358Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.456581Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.459277Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:35.488720Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.062068Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:33:47.384311Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:33:47.384311Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] 
[2026-05-27T11:33:47.384311Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:33:47.384366Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] 
[2026-05-27T11:33:47.384373Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:33:47.384380Z] [nf-4a5cf4089a802ee403db71639bfcf12b-fe0d5-hqn9d] [615_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec