File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/be9cea793ec11e1d7128cff0bc07a9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7j47bfz2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:37:32,973 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:37:33,799 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:37:33,979 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:37:34,953 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:37:35,153 - cnv_pipe.batch.run_model - INFO - Processing cluster 816 with 175 probes
2026-05-27 11:37:35,526 - cnv_pipe.batch.run_model.cluster816 - INFO - Child process started for cluster 816 with 175 probes
2026-05-27 11:38:27,478 - cnv_pipe.batch.run_model.cluster816 - INFO - Child process finished cluster 816. Wrote cluster_816_samples.csv and cluster_816_params.csv
2026-05-27 11:38:27,480 - cnv_pipe.batch.run_model - INFO - Cluster 816 finished in 52.33 seconds. Status: SUCCESS