[2026-05-27T11:33:33.412618Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:33.414113Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:33.414138Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:33.414149Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:33.414161Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXrM14lO'
[2026-05-27T11:33:33.414170Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:33.414182Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:33.414194Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:33.414204Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] memMb: 252470
[2026-05-27T11:33:33.414215Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:33.414226Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:33.414237Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:33.414249Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:33.414262Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:33.414684Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:33.414792Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:33.424738Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:33.425322Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:33.425629Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:33.425825Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:33.426096Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.426715Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.426891Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.427034Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.427325Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.427839Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.427962Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.428364Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.428821Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.429529Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.429786Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.430146Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.431971Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.432960Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.433155Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:33.433382Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.433635Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.433769Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.433990Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.434120Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.434431Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.434707Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.435440Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.435582Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.435845Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.435982Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.436214Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.436360Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.436908Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.437516Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.437742Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.437882Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.438111Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.438238Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.438458Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.438600Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.439245Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.439835Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.440069Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.440200Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.440425Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.440549Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.440778Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.441320Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.442036Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.442178Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.442406Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.442538Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.442869Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.443123Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.444081Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.444220Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.444444Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.444573Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.444798Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.444923Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.445313Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.446440Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.446676Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.446825Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.447062Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.447187Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.447421Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.447724Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.448888Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.449033Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.449257Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.449382Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.450793Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.451872Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.452111Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.452245Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.452470Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.452600Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.454435Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.455567Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.455877Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.456030Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.456258Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.456391Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.456739Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.457988Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.458226Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.458356Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.458581Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.458715Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.459090Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.460486Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.460725Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.460860Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.461084Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.461218Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.461459Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.461712Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.463095Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.463232Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.463460Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.463587Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.492671Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.492999Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.493191Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.493411Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.495770Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.496017Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.496547Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.496720Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.497215Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.497634Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.498002Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.498725Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.498996Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.499674Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.500366Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.500631Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.501421Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.501659Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:33.502889Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:33.510174Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T11:33:33.514791Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T11:33:33.515718Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T11:33:33.520580Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T11:33:33.523106Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T11:33:33.525834Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T11:33:33.527793Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T11:33:33.529110Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T11:33:33.673556Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.673644Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.673687Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.673725Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.675573Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.676097Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.676794Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.677432Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.686553Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T11:33:33.688860Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T11:33:33.691081Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T11:33:33.692183Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T11:33:33.843421Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.845115Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.849277Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T11:33:35.112049Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.113616Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.118088Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T11:33:35.278616Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.280260Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.284230Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T11:33:35.845962Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.847673Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.851512Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T11:33:36.012380Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.014349Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.018389Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T11:33:36.129119Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.130893Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.135051Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T11:33:36.245761Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.245879Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.248087Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.248497Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.249452Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.253021Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T11:33:36.256712Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.257285Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T11:33:36.260748Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T11:33:36.321505Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.323130Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.326986Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T11:33:36.487898Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.489490Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.493403Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T11:33:36.604170Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.605792Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.609739Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T11:33:36.670385Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.672002Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.676017Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T11:33:36.887015Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.888589Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.892352Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T11:33:36.953144Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.953276Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.955057Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.955424Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.959759Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T11:33:36.961023Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T11:33:37.020593Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.022124Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.026237Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T11:33:37.086882Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.088451Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.092572Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T11:33:37.120830Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.122282Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.125742Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T11:33:37.236715Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.238208Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.242121Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T11:33:37.603467Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.604979Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.608895Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T11:33:37.669541Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.671087Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.675271Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T11:33:38.737531Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.738881Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.742562Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T11:33:38.803232Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.804693Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.808707Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T11:33:39.470299Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.471710Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.475447Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T11:33:39.536201Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.537750Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.541337Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T11:33:39.570148Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.571588Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.575147Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T11:33:39.587663Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.589019Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.592644Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T11:33:39.621224Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.622597Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.626599Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T11:33:39.639160Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.640571Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.644001Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T11:33:39.704766Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.706254Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.710218Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T11:33:39.710612Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.711916Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.715278Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T11:33:39.776139Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.776254Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.777561Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.778029Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.782468Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T11:33:39.783669Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T11:33:39.843170Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.843274Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.844534Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.844935Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.850453Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T11:33:39.850978Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T11:33:40.460534Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.461893Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.465314Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T11:33:40.526313Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.528347Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.532408Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T11:33:40.643391Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.645427Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.648786Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T11:33:40.661812Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.663793Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.667043Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T11:33:40.695968Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.698002Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.702094Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T11:33:40.714715Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.716905Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.720907Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T11:33:40.831852Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.833840Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.837683Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T11:33:40.898593Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.900514Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.904552Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T11:33:41.015547Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.017550Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.021500Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T11:33:41.082343Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.084205Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.088146Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T11:33:41.149005Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.150849Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.155062Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T11:33:41.215897Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.216058Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.217970Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.218485Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.222797Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T11:33:41.223857Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T11:33:41.284736Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.286631Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.290897Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T11:33:41.295385Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.295522Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.297312Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.297724Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.301947Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T11:33:41.302877Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T11:33:41.362756Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.362918Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.362982Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.364694Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.365233Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.365913Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.371339Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T11:33:41.374062Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T11:33:41.375729Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T11:33:41.431606Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.433574Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.437281Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T11:33:41.498260Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.500290Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.504202Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T11:33:41.565063Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.566857Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.570718Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T11:33:41.681896Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.683597Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.687354Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T11:33:41.748240Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.749954Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.754008Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T11:33:42.215514Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.216885Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.220453Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T11:33:42.281308Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.282437Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.286436Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T11:33:42.647678Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.648788Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.652674Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T11:33:42.681265Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.682281Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.686372Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T11:33:42.699081Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.700655Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.704233Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T11:33:42.765230Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.766932Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.770732Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T11:33:42.771491Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.773054Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.776828Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T11:33:42.887755Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.889386Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.893458Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T11:33:42.954325Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.955958Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.959883Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T11:33:43.020632Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.021622Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.025301Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T11:33:43.085932Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.086938Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.090764Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T11:33:43.151436Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.152389Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.155854Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T11:33:43.216490Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.217441Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.220837Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T11:33:43.782510Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.783423Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.787476Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T11:33:43.847877Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.848859Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.852698Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T11:33:43.913319Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.913446Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.914354Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.914728Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.919270Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T11:33:43.960217Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T11:33:43.979526Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.979643Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.980492Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.984481Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T11:33:44.095185Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.096114Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.099979Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T11:33:44.160664Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.026100Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.026933Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.030677Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T11:33:45.091311Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.706433Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.707210Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.710518Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T11:33:45.771447Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.086028Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.086761Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.090475Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T11:33:46.151091Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.465725Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.466456Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.469729Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T11:33:46.530619Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:48.096871Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:48.097622Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:48.100678Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T11:33:48.161658Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.577805Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.579182Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.582355Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T11:33:58.643277Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.643844Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.644052Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.644388Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.645056Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.652355Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:58.654201Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:58.655277Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:58.710133Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.710215Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.710256Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.710551Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.710816Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.714417Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:58.715692Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:58.775253Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.775333Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.775640Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:58.778479Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:58.839636Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:34:06.658533Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:34:21.533241Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:34:21.533241Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] 
[2026-05-27T11:34:21.533241Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:34:21.533317Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] 
[2026-05-27T11:34:21.533330Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:34:21.533342Z] [nf-efcb64ec13f1a3dba0ffc69de50c57aa-b1725-z9lfk] [791_1] [WorkflowRunner] Elapsed time for full workflow: 48 sec