File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/37/e3181f8e17d2239832baf33496375f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hx0__xkx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:37:43,352 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:37:44,721 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:37:45,027 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:37:46,899 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:37:47,015 - cnv_pipe.batch.run_model - INFO - Processing cluster 837 with 192 probes
2026-05-27 11:37:47,780 - cnv_pipe.batch.run_model.cluster837 - INFO - Child process started for cluster 837 with 192 probes
2026-05-27 11:39:23,902 - cnv_pipe.batch.run_model.cluster837 - INFO - Child process finished cluster 837. Wrote cluster_837_samples.csv and cluster_837_params.csv
2026-05-27 11:39:23,904 - cnv_pipe.batch.run_model - INFO - Cluster 837 finished in 96.89 seconds. Status: SUCCESS