File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/b5d0bf1f14e0dba7e26365d49016e3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-js1t3mj4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:37:26,280 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:37:27,083 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:37:27,253 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:37:28,192 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:37:28,354 - cnv_pipe.batch.run_model - INFO - Processing cluster 762 with 178 probes
2026-05-27 11:37:28,726 - cnv_pipe.batch.run_model.cluster762 - INFO - Child process started for cluster 762 with 178 probes
2026-05-27 11:38:23,277 - cnv_pipe.batch.run_model.cluster762 - INFO - Child process finished cluster 762. Wrote cluster_762_samples.csv and cluster_762_params.csv
2026-05-27 11:38:23,278 - cnv_pipe.batch.run_model - INFO - Cluster 762 finished in 54.92 seconds. Status: SUCCESS