Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/e97f4b3362836fac6bc2361ac0ca94/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/d2bc159c1c7d65cb5bc7c5c1f3141f/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/d2bc159c1c7d65cb5bc7c5c1f3141f/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/e97f4b3362836fac6bc2361ac0ca94/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXLlXIUT/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXLlXIUT/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXLlXIUT/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T11:33:28.829073Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:28.830752Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:28.830779Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:28.830785Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:28.830789Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXLlXIUT'
[2026-05-27T11:33:28.830793Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:28.830798Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:28.830802Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:28.830806Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T11:33:28.830809Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:28.830813Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:28.830817Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:28.830820Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:28.830824Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:28.831276Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:28.831401Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:28.837624Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:28.838292Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:28.838519Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:28.838759Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:28.839030Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.839567Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.839656Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.839727Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.839843Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.839909Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.840027Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.840096Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.840310Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.840716Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.840904Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.841045Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.841481Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.843380Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.843688Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:28.843779Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.843912Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.843978Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.844089Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.844152Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.844365Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.844487Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.844768Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845003Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845114Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845176Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845290Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845355Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845468Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845532Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845643Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845719Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845850Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.845919Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.846033Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.846166Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.846591Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.846898Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847286Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847348Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847460Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847520Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847629Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847692Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847799Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847862Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.847972Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.848033Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.848217Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.848300Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.848662Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849085Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849195Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849254Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849362Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849424Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849539Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849602Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849706Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849767Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849879Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.849939Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.850049Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.850113Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.850351Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.850847Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.850959Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.851019Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.851127Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.851191Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.851300Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.851362Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.851468Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.851531Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.852973Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.853098Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.853224Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.853470Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854045Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854124Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854236Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854298Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854409Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854471Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854582Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854649Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854765Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854835Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.854941Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.855056Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.855474Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.855989Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856099Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856163Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856296Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856361Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856481Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856543Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856652Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856752Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856908Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.856979Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.857108Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.857407Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.858138Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.858239Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.858348Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.858414Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.858523Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.858585Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.861173Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.861965Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.862331Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.862413Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.877559Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.877687Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.877934Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.878870Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.879000Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.879510Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.880000Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.880277Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.880779Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.881162Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.882106Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.882547Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.883087Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.883710Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.884379Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.885645Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.886694Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.887912Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.890832Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:28.895021Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:28.895592Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:28.899830Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:28.904012Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:28.905947Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:28.907967Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:28.908905Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:28.973769Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.974856Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.977616Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.979093Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:28.979611Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.983254Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:29.094257Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.095666Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.099893Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:29.461775Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.463079Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.466375Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:29.527652Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.529018Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.532290Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:30.044692Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.045964Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.049201Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:30.160475Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.160599Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.161746Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.162023Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.165729Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:30.166394Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:30.277976Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.278099Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.279306Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.279998Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.283672Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:30.545238Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.546782Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.550138Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:30.761842Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.763772Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.766855Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:30.828015Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.829581Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.832633Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:30.851441Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:30.861827Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.861930Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.863750Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.864208Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.867676Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:30.868797Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:30.928576Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.930103Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.933509Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:30.994648Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.996497Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.000105Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:31.111456Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.113471Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.116926Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:31.938577Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:31.980235Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.981708Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.984694Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:32.045941Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.047789Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.050857Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:32.063854Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.065183Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.068224Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:32.129398Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.129578Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.131135Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.131553Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.134703Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:32.136137Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:32.195927Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.197911Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.198498Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.200357Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.202872Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:32.205047Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:32.234456Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.236159Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.236556Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.239483Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.239718Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:32.242551Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:32.303973Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.304106Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.304144Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.305847Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.306271Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.306929Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.309189Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:32.312114Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:32.313392Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:32.373863Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.373957Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.375077Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.375355Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.378804Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:32.380064Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:32.407714Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.408895Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.411645Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:32.473063Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.473150Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.474182Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.474603Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.478709Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:32.479805Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:32.539675Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.540855Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.544169Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:33.056381Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.056487Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.057599Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.057937Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.061386Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:33.062455Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:33.123930Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.124035Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.125065Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.125512Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.128979Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:33.130205Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:33.190371Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.191423Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.194591Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:33.255979Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.257115Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.260180Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:33.472255Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.472377Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.473336Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.473985Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.477320Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:33.478445Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:33.540943Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.541057Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.542000Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.542360Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.546159Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:33.546637Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:33.607398Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.608407Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.611494Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:33.672708Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.673747Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.676421Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:33.738077Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.739130Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.742421Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:33.803593Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.803686Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.803709Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.804651Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.804915Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.805318Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.808737Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:33.809269Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:33.809815Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:33.837544Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.838700Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.839158Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.841858Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.842311Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.842618Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:33.844784Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.845100Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:33.847744Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:33.876848Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.877700Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.880316Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:33.893481Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.894488Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.897197Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:33.910373Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.911261Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.914268Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:33.927336Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.928262Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.931133Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:33.992584Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.993517Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.996805Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:34.025573Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.026476Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.029812Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:34.191248Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.192262Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.195680Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:34.357405Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.358265Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.361459Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:34.472921Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.473015Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.473918Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.474270Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.477561Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:34.478325Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:34.538899Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.539003Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.539782Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.540051Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.543193Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:34.544129Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:34.604518Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.604595Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.605370Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.605639Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.609204Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:34.610298Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:34.670251Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.671123Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.674032Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:34.703412Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.704235Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.707220Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:34.768492Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.769308Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.772057Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:34.833440Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.834363Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.837080Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:34.898823Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.899650Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.902775Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:34.964076Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.964881Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.967955Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:35.029211Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.030033Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.032826Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:35.094230Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.094313Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.095047Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.095320Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.098180Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:35.099155Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:35.129027Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.129918Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.130368Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.131385Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.134335Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:35.135688Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:35.497761Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.498526Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.501321Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:35.506326Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.506983Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.509821Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:35.539162Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.539840Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.542714Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:35.572148Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.572884Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.576098Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:35.637306Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.638040Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.641027Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:35.670313Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.671051Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.673802Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:35.735076Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.736073Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.739415Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:35.800339Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.801239Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.804237Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:35.865285Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.865367Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.866223Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.866785Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.869629Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:35.871264Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:35.899316Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.900406Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.900685Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.902752Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.903280Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:35.905708Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:35.935049Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.935124Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.935733Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.936008Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.938901Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:35.939704Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:35.968079Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.968755Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.971590Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:35.984615Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.985238Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.988418Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:36.001126Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.001773Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.004961Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:36.033789Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.034474Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.037259Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:36.066404Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.082621Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.083168Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.085916Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:36.115096Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.229610Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.230176Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.232814Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:36.262502Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.477196Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.477786Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.480509Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:36.509618Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.573877Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.574389Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.576961Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:36.606219Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.606283Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.606749Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.609203Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:36.638984Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.703121Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.703637Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.705956Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:36.735441Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.000086Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.000582Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.002949Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:37.032502Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.032803Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.032932Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.033165Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.033416Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.038107Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:37.038367Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:37.039205Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:37.065395Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.065453Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.065473Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.065649Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.065901Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.068333Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:37.069226Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:37.098811Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.098873Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.099052Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.101171Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:37.131049Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.450674Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:33:47.719092Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:33:47.719092Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] 
[2026-05-27T11:33:47.719092Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:33:47.719153Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] 
[2026-05-27T11:33:47.719160Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:33:47.719166Z] [nf-3fe97f4b3362836fac6bc2361ac0ca94-8a810-qxggv] [626_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec