File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/4fc0682c5515f98b0be64c0a6d1dbc/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-00gm4s1v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:22,688 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:23,471 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:23,641 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:24,627 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:24,797 - cnv_pipe.batch.run_model - INFO - Processing cluster 750 with 116 probes
2026-05-27 11:38:25,173 - cnv_pipe.batch.run_model.cluster750 - INFO - Child process started for cluster 750 with 116 probes
2026-05-27 11:39:01,535 - cnv_pipe.batch.run_model.cluster750 - INFO - Child process finished cluster 750. Wrote cluster_750_samples.csv and cluster_750_params.csv
2026-05-27 11:39:01,536 - cnv_pipe.batch.run_model - INFO - Cluster 750 finished in 36.74 seconds. Status: SUCCESS