cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_coding_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_altera_v3_targets_coding_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:164000001, elapsed 0.0s, est remaining 0.8s, peak mem 100MB, user 0.1s, sys 0.7s, output queue size 5
progress 10% @chr2:75000001, elapsed 0.1s, est remaining 0.7s, peak mem 100MB, user 0.1s, sys 1.8s, output queue size 31
progress 15% @chr2:232000001, elapsed 0.1s, est remaining 0.6s, peak mem 100MB, user 0.2s, sys 2.7s, output queue size 9
progress 20% @chr3:154000001, elapsed 0.1s, est remaining 0.6s, peak mem 100MB, user 0.2s, sys 3.8s, output queue size 3
progress 25% @chr4:114000001, elapsed 0.2s, est remaining 0.5s, peak mem 100MB, user 0.3s, sys 4.8s, output queue size 10
progress 30% @chr5:89000001, elapsed 0.2s, est remaining 0.5s, peak mem 100MB, user 0.4s, sys 5.9s, output queue size 18
progress 35% @chr6:64000001, elapsed 0.3s, est remaining 0.5s, peak mem 100MB, user 0.4s, sys 6.8s, output queue size 1
progress 40% @chr7:58000001, elapsed 0.3s, est remaining 0.4s, peak mem 100MB, user 0.5s, sys 7.9s, output queue size 4
progress 45% @chr8:56000001, elapsed 0.3s, est remaining 0.4s, peak mem 100MB, user 0.6s, sys 9.1s, output queue size 5
progress 50% @chr9:71000001, elapsed 0.4s, est remaining 0.4s, peak mem 100MB, user 0.6s, sys 10.0s, output queue size 2
progress 55% @chr10:93000001, elapsed 0.4s, est remaining 0.3s, peak mem 100MB, user 0.7s, sys 11.1s, output queue size 3
progress 60% @chr11:119000001, elapsed 0.4s, est remaining 0.3s, peak mem 100MB, user 0.7s, sys 12.1s, output queue size 6
progress 65% @chr13:13000001, elapsed 0.5s, est remaining 0.3s, peak mem 100MB, user 0.8s, sys 13.1s, output queue size 2
progress 70% @chr14:50000001, elapsed 0.5s, est remaining 0.2s, peak mem 100MB, user 0.8s, sys 14.1s, output queue size 17
progress 75% @chr16:14000001, elapsed 0.5s, est remaining 0.2s, peak mem 100MB, user 0.9s, sys 15.1s, output queue size 1
progress 80% @chr18:1, elapsed 0.6s, est remaining 0.1s, peak mem 100MB, user 0.9s, sys 16.1s, output queue size 9
progress 85% @chr20:23000001, elapsed 0.6s, est remaining 0.1s, peak mem 100MB, user 0.9s, sys 17.1s, output queue size 2
progress 90% @chrX:35000001, elapsed 0.7s, est remaining 0.1s, peak mem 124MB, user 1.3s, sys 17.8s, output queue size 114
progress 95% @chrY:36000001, elapsed 0.7s, est remaining 0.0s, peak mem 135MB, user 1.6s, sys 18.7s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.0s, est remaining 0.0s, peak mem 166MB, user 2.6s, sys 20.0s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50811681
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.028 user 10.055 sys 11.678 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.000 user 0.006 sys 0.995 real
idle: 76 calls 0.007 user 0.031 sys 38.239 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 174874624 mem 2.748 user 20.727 sys 2.141 real