[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX7vkOuW/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX7vkOuW/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX7vkOuW/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T11:33:28.321074Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:28.321731Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:28.321747Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:28.321755Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:28.321767Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX7vkOuW'
[2026-05-27T11:33:28.321773Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:28.321780Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:28.321786Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:28.321792Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] memMb: 1015785
[2026-05-27T11:33:28.321800Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:28.321806Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:28.321814Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:28.321822Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:28.321830Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:28.322516Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:28.322607Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:28.330294Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:28.331084Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:28.331243Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:28.331543Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:28.331711Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.332388Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.332504Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.332702Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.333062Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.333185Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.333573Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.334019Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.334261Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.334474Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.334659Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.336668Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.337036Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:28.337333Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.337732Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.337985Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.338146Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.338238Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.338391Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.338476Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.338712Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.338804Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.338956Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.339135Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.339515Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.339603Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.339760Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.339848Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.339997Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.340087Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.340247Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.340340Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.340647Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341032Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341207Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341297Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341450Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341536Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341686Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341770Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.341923Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.342011Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.342191Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.342354Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.342671Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.343209Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.343741Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.343910Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.344067Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.344189Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.344339Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.344429Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.344578Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.344673Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.345070Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.345567Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.345725Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.345816Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.345964Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.346051Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.346204Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.346288Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.346439Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.346528Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.346882Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.347505Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.347658Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.347746Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.347900Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.347988Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.348137Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.348239Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.348388Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.348481Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.350235Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.351007Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.351184Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.351370Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.351529Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.351619Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.351771Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.351861Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.352045Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.352258Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353090Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353185Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353338Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353435Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353589Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353678Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353834Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.353923Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.354301Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.355267Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.355441Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.355532Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.355692Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.355781Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.355931Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.356021Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.356250Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.356423Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.357533Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.357626Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.357779Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.357870Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.358019Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.358107Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.358257Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.358348Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.361282Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.362302Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.362674Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.362764Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.378972Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.380143Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.380299Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.380473Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.380928Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.382147Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.382290Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.382600Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.382744Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.383006Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.383318Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.383990Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.384735Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.384939Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.385488Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:28.385735Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.386035Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:28.386425Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.387451Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.394658Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:28.397139Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:28.398571Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:28.399869Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:28.402247Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:28.406906Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:28.408280Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:28.522860Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.522950Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.524260Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.524794Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.528653Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T11:33:28.529223Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:28.591371Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.592856Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.597536Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:29.712311Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.713780Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.717393Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:29.768148Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:29.778705Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.780171Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.783800Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:29.895255Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.896717Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.900392Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:30.112130Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.114445Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.118414Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:30.229315Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.231574Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.235411Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:30.396619Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.399049Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.403135Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:30.564218Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.566555Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.570258Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:30.731645Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.734138Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.737634Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:30.848995Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.851284Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.855453Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:30.966357Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.968856Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.972909Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:31.234492Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.235880Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.239722Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:31.268855Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.271007Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.274280Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T11:33:31.279181Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.281283Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.284379Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T11:33:31.313484Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.315774Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.319369Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:31.320024Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.322169Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.325604Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T11:33:31.386457Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.388743Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.392662Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:31.553749Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.555988Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.559935Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T11:33:31.620657Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.622853Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.626133Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:31.737451Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.737577Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.740132Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.740941Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.744398Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:31.745650Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T11:33:31.805969Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.808193Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.812105Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:31.923252Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.925395Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.928892Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T11:33:31.989957Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.992086Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.995649Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:32.056801Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.058843Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.062502Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:32.067275Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.069288Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.072853Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T11:33:32.133742Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.133901Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.135916Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.136317Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.140210Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T11:33:32.175152Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:32.201333Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.203518Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.207324Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:32.318242Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.320335Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.323889Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:32.986909Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.988204Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.991881Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T11:33:33.052997Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.054278Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.057971Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:33.169511Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.170822Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.174533Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:33.787608Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.788786Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.792231Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T11:33:33.806572Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.807734Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.811533Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T11:33:33.840659Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.841889Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.845632Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:33.846290Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.847413Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.850668Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:33.962544Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.962639Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.963746Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.964099Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.967783Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T11:33:33.968670Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T11:33:34.030134Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.030244Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.031416Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.031812Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.035226Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T11:33:34.036732Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T11:33:34.096476Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.096586Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.097787Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.098301Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.102086Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T11:33:34.103001Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:34.164811Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.164981Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.166159Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.166768Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.170550Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T11:33:34.172065Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T11:33:34.233241Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.233329Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.234498Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.234857Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.238469Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T11:33:34.239513Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T11:33:34.302170Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.302270Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.303324Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.303769Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.307499Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T11:33:34.309158Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:34.368822Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.369978Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.373500Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:34.535234Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.535324Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.536460Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.537162Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.540878Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:34.541989Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T11:33:34.555567Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.556727Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.560572Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T11:33:34.589770Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.589857Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.590935Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.591932Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.596409Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:34.597416Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:34.598846Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.600059Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.603445Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:34.865272Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.866374Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.869872Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T11:33:34.932292Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.933423Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.936968Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:35.751566Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.752712Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.756202Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T11:33:35.817311Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.818396Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.821921Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:36.334383Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.335530Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.338909Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:36.400580Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.401633Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.404512Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T11:33:36.406915Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.407896Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.410681Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T11:33:36.439945Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.440984Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.443993Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T11:33:36.450185Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.451211Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.454296Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T11:33:36.483535Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.484726Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.487917Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T11:33:36.489122Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.490110Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.492975Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T11:33:36.522148Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.523218Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.526217Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:36.526958Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.527913Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.530488Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T11:33:36.592289Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.592390Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.593338Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.593620Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.597535Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:36.660142Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T11:33:36.708674Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.708772Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.708803Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.709724Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.711880Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.712378Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.712742Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T11:33:36.716904Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:36.717142Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:36.776653Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.777610Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.780817Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:36.785665Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.786582Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.789325Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T11:33:36.850964Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.851069Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.851912Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.852755Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.855934Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T11:33:36.857179Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:36.918922Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.919865Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:36.923121Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:37.034922Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.035049Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.035910Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.038000Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.039932Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:37.041225Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:37.102846Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.103735Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.107039Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T11:33:37.168366Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.169289Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.172696Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T11:33:37.233851Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.234729Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.238244Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T11:33:37.299646Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.300526Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.303620Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T11:33:37.365348Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.366211Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.369254Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T11:33:37.430965Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.431843Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.434733Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T11:33:37.496326Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.497213Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.500579Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:37.612058Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.612958Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.616199Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:37.677566Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.678399Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.681420Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T11:33:37.743923Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.744763Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.747953Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T11:33:37.809166Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.809965Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.812886Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T11:33:37.874616Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.875465Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.879147Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:37.883858Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.884063Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.884792Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.885018Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.889545Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T11:33:37.890638Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T11:33:37.952023Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.952128Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.952860Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.956391Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:38.569125Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.569211Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.569873Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.570363Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.573393Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T11:33:38.574228Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T11:33:38.635054Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.635145Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.950349Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.951035Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:38.954104Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T11:33:39.015553Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.380825Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.381526Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.384512Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T11:33:39.445806Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.761022Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.761116Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.761737Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.762077Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.765009Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T11:33:39.765638Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T11:33:39.826322Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.826409Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.341771Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.342505Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.344925Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T11:33:40.374642Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.375117Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.375296Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.375981Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.376443Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.380998Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:40.382250Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:40.406962Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:40.408436Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.408490Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.408744Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.409254Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.411558Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:40.412183Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:40.413431Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.445159Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.445224Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.445457Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.447591Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:40.477449Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:47.347303Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:34:01.442044Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:34:01.442044Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] 
[2026-05-27T11:34:01.442044Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:34:01.442101Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] 
[2026-05-27T11:34:01.442109Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:34:01.442118Z] [nf-4c4cb5ac75f9384ef66d526b42e1efaa-0513b-68npx] [561_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec