File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/577f08fc6568ee8dcb07fe78d932f7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-17zd4op4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:37:25,388 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:37:26,220 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:37:26,389 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:37:27,333 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:37:27,500 - cnv_pipe.batch.run_model - INFO - Processing cluster 760 with 177 probes
2026-05-27 11:37:27,886 - cnv_pipe.batch.run_model.cluster760 - INFO - Child process started for cluster 760 with 177 probes
2026-05-27 11:38:22,237 - cnv_pipe.batch.run_model.cluster760 - INFO - Child process finished cluster 760. Wrote cluster_760_samples.csv and cluster_760_params.csv
2026-05-27 11:38:22,238 - cnv_pipe.batch.run_model - INFO - Cluster 760 finished in 54.74 seconds. Status: SUCCESS