Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/59aa9b455b43f28f90ccac9b740b58/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/42f5334e31345bae82309fbb4f085c/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/42f5334e31345bae82309fbb4f085c/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/59aa9b455b43f28f90ccac9b740b58/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-05-27T11:33:39.250500Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:39.251358Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:39.251367Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:39.251371Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:39.251375Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX4YYcPM'
[2026-05-27T11:33:39.251379Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:39.251384Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:39.251387Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:39.251391Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T11:33:39.251395Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:39.251398Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:39.251402Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:39.251406Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:39.251409Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:39.251980Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:39.252104Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:39.258020Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:39.258787Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:39.258957Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:39.259201Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:39.259489Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.260270Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.260371Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.260491Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.260750Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.260987Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.261176Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.261342Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.261900Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.262379Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.262540Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.264377Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.264637Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.264770Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:39.265188Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.265543Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.265825Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.265920Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266068Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266137Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266327Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266400Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266515Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266584Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266701Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.266915Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267275Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267344Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267460Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267551Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267660Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267735Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267846Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.267908Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.268016Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.268102Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.268221Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.268331Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.268646Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.268967Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.269251Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.269597Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.270173Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.270547Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.270659Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.270723Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.270838Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.270964Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.271077Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.271144Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.271254Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.271323Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.271432Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.271494Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.271742Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272173Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272293Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272372Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272481Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272545Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272678Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272738Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272852Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.272914Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.273023Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.273092Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.273305Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.273805Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.274365Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.274430Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.274544Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.274608Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.274715Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.274778Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.276233Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.276828Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.276963Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277036Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277152Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277221Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277343Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277407Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277526Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277590Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277705Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.277776Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.278069Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.278688Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.278800Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.278865Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.278975Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.279040Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.279149Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.279216Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.279336Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.279399Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.279513Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.279573Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.298554Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.299361Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.299475Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.300261Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.300872Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.301134Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.301791Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.302080Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.302704Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.303001Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.303641Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.304541Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.304803Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.305252Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.306240Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.308756Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.309382Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-05-27T11:33:39.309841Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.312445Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:39.313073Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T11:33:39.317736Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-05-27T11:33:39.318528Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-05-27T11:33:39.322685Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T11:33:39.325962Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T11:33:39.326378Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:39.326703Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-05-27T11:33:39.327194Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:39.392583Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.392664Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.392687Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.392706Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.393538Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.393755Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.393965Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.394437Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.397819Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T11:33:39.401194Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-05-27T11:33:39.402865Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-05-27T11:33:39.403906Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-05-27T11:33:39.459571Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.460692Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:39.464202Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-05-27T11:33:40.228267Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.229420Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.233576Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-05-27T11:33:40.695823Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.697384Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.701043Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-05-27T11:33:40.705404Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.706695Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.709752Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-05-27T11:33:40.771081Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.772862Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:40.775934Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-05-27T11:33:41.137937Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.139272Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.143391Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-05-27T11:33:41.254425Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.254522Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.256243Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.256754Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.260541Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-05-27T11:33:41.261594Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-05-27T11:33:41.321748Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.323706Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.324281Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.326328Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.329901Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-05-27T11:33:41.334373Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.335559Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.338348Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:41.368993Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-05-27T11:33:41.399749Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.399904Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.401225Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.401631Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.405404Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-05-27T11:33:41.406564Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-05-27T11:33:41.767897Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.769116Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.772693Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T11:33:41.834071Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.835150Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.838518Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T11:33:41.899750Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.900908Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:41.904483Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T11:33:42.015749Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.016947Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.020399Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T11:33:42.081474Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.081564Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.082577Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.083263Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.086497Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-05-27T11:33:42.087912Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-05-27T11:33:42.147661Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.147766Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.147809Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.147830Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.148861Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.149328Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.149589Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.150034Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.153556Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T11:33:42.154982Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-05-27T11:33:42.156371Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-05-27T11:33:42.191335Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-05-27T11:33:42.215968Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.216056Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.216109Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.217165Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.217658Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.218020Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.221651Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-05-27T11:33:42.223468Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-05-27T11:33:42.224664Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-05-27T11:33:42.284151Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.284230Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.284262Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.285087Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.285545Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.285778Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.290410Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-05-27T11:33:42.292323Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-05-27T11:33:42.293505Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-05-27T11:33:42.351200Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.352554Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.355871Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-05-27T11:33:42.416811Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.417991Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.421561Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-05-27T11:33:42.984238Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.985246Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.988224Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-05-27T11:33:43.017320Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.018245Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.021958Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-05-27T11:33:43.034553Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.035476Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.038604Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T11:33:43.100006Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.100993Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.103985Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T11:33:43.165387Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.165489Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.166365Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.166691Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.169725Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-05-27T11:33:43.170715Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-05-27T11:33:43.182868Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.183692Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.186549Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-05-27T11:33:43.215675Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.216886Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.217182Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.219639Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.220152Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-05-27T11:33:43.222690Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T11:33:43.227598Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.228471Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.231629Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-05-27T11:33:43.260393Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.260460Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.261218Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.261466Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.264903Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-05-27T11:33:43.266088Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-05-27T11:33:43.326008Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.326105Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.326904Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.327221Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.330562Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-05-27T11:33:43.331082Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-05-27T11:33:43.391549Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.391638Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.392359Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.392679Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.396583Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-05-27T11:33:43.397619Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-05-27T11:33:43.458112Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.458953Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.462750Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-05-27T11:33:43.523280Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.524237Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.527699Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-05-27T11:33:43.588819Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.589791Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.593350Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-05-27T11:33:43.754637Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.755503Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.758905Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-05-27T11:33:43.787721Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.788591Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.790893Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.791761Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-05-27T11:33:43.791887Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.794946Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-05-27T11:33:43.856520Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.857350Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.860403Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-05-27T11:33:43.921508Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.922457Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.925963Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-05-27T11:33:43.938676Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.939973Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.942776Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-05-27T11:33:43.972311Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.972464Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.972521Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.973326Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.973578Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.973878Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:43.981413Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-05-27T11:33:43.982966Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-05-27T11:33:43.983841Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-05-27T11:33:44.010307Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.011091Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.013954Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T11:33:44.043653Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.044453Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.047750Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T11:33:44.048478Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.049087Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.052150Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-05-27T11:33:44.113406Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.113486Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.114108Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.114455Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.117828Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-05-27T11:33:44.118964Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-05-27T11:33:44.178704Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.178794Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.179473Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.180001Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.183561Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T11:33:44.230952Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-05-27T11:33:44.244612Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.244698Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.245375Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.245729Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.249859Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-05-27T11:33:44.250057Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-05-27T11:33:44.310467Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.311180Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.314456Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-05-27T11:33:44.327488Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.328181Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.331008Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-05-27T11:33:44.392342Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.392429Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.392976Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.393439Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.396621Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-05-27T11:33:44.397564Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-05-27T11:33:44.427173Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.427883Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.429961Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.430695Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.430952Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-05-27T11:33:44.433546Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-05-27T11:33:44.495356Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.496095Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.499577Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-05-27T11:33:44.560723Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.561412Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.564856Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-05-27T11:33:44.626008Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.626700Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.629834Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-05-27T11:33:44.791892Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.792528Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.795849Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-05-27T11:33:44.856899Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.971631Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.972504Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:44.975456Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-05-27T11:33:45.036679Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.036782Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.037527Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:45.040593Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-05-27T11:33:45.101772Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.118817Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.119388Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.122080Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-05-27T11:33:46.183751Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.298231Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.299017Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.301921Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T11:33:46.363237Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.363338Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.363365Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.363908Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.364292Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.367019Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-05-27T11:33:46.395091Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-05-27T11:33:46.397336Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.397419Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.612123Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.612668Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.615768Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-05-27T11:33:46.644634Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.644987Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.645148Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.645472Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.645733Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.650855Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:46.651970Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:46.652811Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:46.678934Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.679004Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.679247Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.681692Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:46.686936Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.687168Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.689781Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:46.719106Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.719203Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.719419Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.722028Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:46.783582Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:49.854586Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:33:58.140027Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:33:58.140027Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] 
[2026-05-27T11:33:58.140027Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:33:58.140100Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] 
[2026-05-27T11:33:58.140109Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:33:58.140116Z] [nf-ee59aa9b455b43f28f90ccac9b740b58-ae9b3-blpf5] [594_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec