File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/3e323608ac2ccdc952662b387e7768/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yyojfk15 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:21,637 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:22,423 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:22,591 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:23,704 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:23,773 - cnv_pipe.batch.run_model - INFO - Processing cluster 840 with 199 probes
2026-05-27 11:38:24,159 - cnv_pipe.batch.run_model.cluster840 - INFO - Child process started for cluster 840 with 199 probes
2026-05-27 11:39:22,317 - cnv_pipe.batch.run_model.cluster840 - INFO - Child process finished cluster 840. Wrote cluster_840_samples.csv and cluster_840_params.csv
2026-05-27 11:39:22,318 - cnv_pipe.batch.run_model - INFO - Cluster 840 finished in 58.55 seconds. Status: SUCCESS