File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/0690827be3a0ea1ac6da492e8ddac5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c5uphc_3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:37:44,854 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:37:46,231 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:37:46,529 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:37:48,551 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:37:48,677 - cnv_pipe.batch.run_model - INFO - Processing cluster 853 with 192 probes
2026-05-27 11:37:49,327 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process started for cluster 853 with 192 probes
2026-05-27 11:39:28,145 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process finished cluster 853. Wrote cluster_853_samples.csv and cluster_853_params.csv
2026-05-27 11:39:28,148 - cnv_pipe.batch.run_model - INFO - Cluster 853 finished in 99.47 seconds. Status: SUCCESS