File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/1ab40c21b74faa08b26952fafa52b7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n_2_q7cq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:16,125 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:16,935 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:17,107 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:18,058 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:18,229 - cnv_pipe.batch.run_model - INFO - Processing cluster 1076 with 158 probes
2026-05-27 11:38:18,616 - cnv_pipe.batch.run_model.cluster1076 - INFO - Child process started for cluster 1076 with 158 probes
2026-05-27 11:39:04,817 - cnv_pipe.batch.run_model.cluster1076 - INFO - Child process finished cluster 1076. Wrote cluster_1076_samples.csv and cluster_1076_params.csv
2026-05-27 11:39:04,818 - cnv_pipe.batch.run_model - INFO - Cluster 1076 finished in 46.59 seconds. Status: SUCCESS