[2026-05-27T11:33:27.192379Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:27.204384Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:27.204413Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:27.204421Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:27.204428Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXx9NQTu'
[2026-05-27T11:33:27.204432Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:27.204437Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:27.204441Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:27.204444Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T11:33:27.204448Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:27.204451Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:27.204455Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:27.204458Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:27.204462Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:27.205136Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:27.205252Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:27.210916Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:27.211493Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:27.211817Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:27.212087Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:27.212274Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.213159Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.213385Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.213630Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.213815Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.213952Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.214038Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.214437Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.214869Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216102Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216648Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216909Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:27.217347Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217563Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217692Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217759Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217873Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217939Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218053Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218118Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218345Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218424Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218539Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218642Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218895Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219158Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219550Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219615Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219727Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219793Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219902Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219996Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220112Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220174Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220290Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220358Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220469Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220590Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221016Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221085Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221196Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221260Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221378Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221463Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221576Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221639Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221775Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221895Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222018Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222209Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222884Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222991Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.223127Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.223199Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.223317Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.223383Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.235969Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.236073Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.236143Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.236422Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.237109Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.237198Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.237266Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.237373Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.237457Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.237513Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:27.254795Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.255343Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.255759Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.256041Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.256726Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.257385Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.258722Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.261046Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.263113Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-05-27T11:33:27.263712Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.268410Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-05-27T11:33:27.269477Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-05-27T11:33:27.271946Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-05-27T11:33:27.274262Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-05-27T11:33:27.277541Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-05-27T11:33:27.278980Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-05-27T11:33:27.279731Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-05-27T11:33:27.380411Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.380511Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.381414Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.382064Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.385929Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T11:33:27.387211Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T11:33:28.299154Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.300198Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.303280Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-05-27T11:33:28.332354Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.333314Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.337082Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-05-27T11:33:28.397817Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.398853Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.401807Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T11:33:28.463165Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.464103Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.467307Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-05-27T11:33:28.729093Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.729919Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.732605Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-05-27T11:33:28.794012Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.794826Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.797951Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-05-27T11:33:28.959438Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.960448Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.963348Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-05-27T11:33:29.024663Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.025636Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.028597Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-05-27T11:33:29.340471Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.341542Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.345529Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-05-27T11:33:29.357531Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.358561Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.361380Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T11:33:29.623298Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.624371Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.627649Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-27T11:33:29.688798Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.689777Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.693010Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T11:33:29.804603Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.805500Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.808948Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-05-27T11:33:29.869988Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.870839Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.874084Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-05-27T11:33:30.236198Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.236967Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.239872Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-05-27T11:33:30.301284Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.301397Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.302128Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.302557Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.305915Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-05-27T11:33:30.307067Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-05-27T11:33:30.367376Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.368326Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.371810Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T11:33:30.432889Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.433649Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.436470Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-05-27T11:33:30.497919Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.498841Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.502500Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-05-27T11:33:30.563510Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.564406Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.567725Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-05-27T11:33:30.879676Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.880315Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.883363Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-05-27T11:33:30.944857Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.945673Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.948731Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-05-27T11:33:31.160467Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.160562Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.161193Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.161707Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.164737Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-05-27T11:33:31.166021Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-27T11:33:31.226382Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.226505Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.227296Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.227623Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.230964Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T11:33:31.231753Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-27T11:33:31.292117Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.292232Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.292817Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.293322Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.296358Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-27T11:33:31.297682Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T11:33:31.357694Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.357823Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.358444Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.358835Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.361951Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-27T11:33:31.403161Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-05-27T11:33:31.423283Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.423415Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.424015Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.424380Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.427279Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-05-27T11:33:31.428313Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-27T11:33:31.488679Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.488770Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.489335Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.489719Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.493008Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-05-27T11:33:31.493973Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T11:33:31.506320Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.506921Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.510221Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-05-27T11:33:31.539658Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.540193Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.542878Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-27T11:33:31.572197Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.572745Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.575595Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-05-27T11:33:31.636947Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.701309Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.701851Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.704386Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-05-27T11:33:31.766255Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.930979Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.931722Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.934728Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-05-27T11:33:31.963821Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.963963Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.964721Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.967654Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-05-27T11:33:32.028968Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.444151Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.444653Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.447711Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-05-27T11:33:32.509012Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.723781Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.724272Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.726937Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-27T11:33:32.788632Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.505142Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.505648Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.508555Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-05-27T11:33:33.569978Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.687424Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.687873Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.690499Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-05-27T11:33:34.752042Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.752338Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.752519Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.752852Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.753089Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.756631Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:34.757715Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:34.758517Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:34.785798Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.785885Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.785911Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.786152Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.786377Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.789065Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:34.789727Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:34.818458Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.818551Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.818787Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.821610Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:34.850873Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:37.771318Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:33:46.092804Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:33:46.092804Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] 
[2026-05-27T11:33:46.092804Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:33:46.092868Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] 
[2026-05-27T11:33:46.092876Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:33:46.092883Z] [nf-353281dd8dac3b6125fb683e22226796-b352d-lznfj] [595_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec