File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/8e57b4ef90735cc9ce944933df55da/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ytgjkho2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:15,169 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:15,995 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:16,168 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:17,255 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:17,336 - cnv_pipe.batch.run_model - INFO - Processing cluster 1068 with 199 probes
2026-05-27 11:38:17,728 - cnv_pipe.batch.run_model.cluster1068 - INFO - Child process started for cluster 1068 with 199 probes
2026-05-27 11:39:15,413 - cnv_pipe.batch.run_model.cluster1068 - INFO - Child process finished cluster 1068. Wrote cluster_1068_samples.csv and cluster_1068_params.csv
2026-05-27 11:39:15,414 - cnv_pipe.batch.run_model - INFO - Cluster 1068 finished in 58.08 seconds. Status: SUCCESS