File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/bf89d48466794e2aff75e65f0bee87/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-iuf89ibz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:32,859 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:33,661 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:33,834 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:34,822 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:34,975 - cnv_pipe.batch.run_model - INFO - Processing cluster 1071 with 183 probes
2026-05-27 11:38:35,346 - cnv_pipe.batch.run_model.cluster1071 - INFO - Child process started for cluster 1071 with 183 probes
2026-05-27 11:39:30,896 - cnv_pipe.batch.run_model.cluster1071 - INFO - Child process finished cluster 1071. Wrote cluster_1071_samples.csv and cluster_1071_params.csv
2026-05-27 11:39:30,897 - cnv_pipe.batch.run_model - INFO - Cluster 1071 finished in 55.92 seconds. Status: SUCCESS