File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/a4594dccd7528de02532e41bcf2a7a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-sgt9zcyv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:24,937 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:25,750 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:25,917 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:26,862 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:27,037 - cnv_pipe.batch.run_model - INFO - Processing cluster 1040 with 153 probes
2026-05-27 11:38:27,420 - cnv_pipe.batch.run_model.cluster1040 - INFO - Child process started for cluster 1040 with 153 probes
2026-05-27 11:39:14,613 - cnv_pipe.batch.run_model.cluster1040 - INFO - Child process finished cluster 1040. Wrote cluster_1040_samples.csv and cluster_1040_params.csv
2026-05-27 11:39:14,614 - cnv_pipe.batch.run_model - INFO - Cluster 1040 finished in 47.58 seconds. Status: SUCCESS