File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/dadc0449e302ee25fde63d94ce061f/.command.log
Size
977 bytes
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_GERMLINE_VC:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (germline_control_2)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/dadc0449e302ee25fde63d94ce061f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/ade13c1bd1d8a3b73bbc3b3f9a6440/germline_control_2.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/dadc0449e302ee25fde63d94ce061f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/a01b403139339519ae45d004a53b11/germline_control_2.forcecall.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/ade13c1bd1d8a3b73bbc3b3f9a6440/germline_control_2.haplotyper.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/a01b403139339519ae45d004a53b11/germline_control_2.forcecall.unfiltered.vcf.gz
==> STAGING COMPLETE (6 inputs)

Checking the headers and starting positions of 2 files
Writing to /tmp/bcftools.BWPlcO
Merging 1 temporary files
Done
Cleaning