File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/960bc70643e80e6881ced881ed9c4f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ydf1l108 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:37:58,940 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:37:59,796 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:37:59,974 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:00,944 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:01,124 - cnv_pipe.batch.run_model - INFO - Processing cluster 971 with 188 probes
2026-05-27 11:38:01,514 - cnv_pipe.batch.run_model.cluster971 - INFO - Child process started for cluster 971 with 188 probes
2026-05-27 11:38:57,456 - cnv_pipe.batch.run_model.cluster971 - INFO - Child process finished cluster 971. Wrote cluster_971_samples.csv and cluster_971_params.csv
2026-05-27 11:38:57,457 - cnv_pipe.batch.run_model - INFO - Cluster 971 finished in 56.33 seconds. Status: SUCCESS