File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/4ac979a0c47212c5b8c687d8cad89f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n_d0q3uj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 11:38:15,182 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 11:38:16,007 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 11:38:16,180 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 11:38:17,118 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 11:38:17,204 - cnv_pipe.batch.run_model - INFO - Processing cluster 956 with 191 probes
2026-05-27 11:38:17,706 - cnv_pipe.batch.run_model.cluster956 - INFO - Child process started for cluster 956 with 191 probes
2026-05-27 11:39:14,048 - cnv_pipe.batch.run_model.cluster956 - INFO - Child process finished cluster 956. Wrote cluster_956_samples.csv and cluster_956_params.csv
2026-05-27 11:39:14,049 - cnv_pipe.batch.run_model - INFO - Cluster 956 finished in 56.84 seconds. Status: SUCCESS