[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX2HtWNq/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX2HtWNq/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX2HtWNq/chr20_14085521-14085828.bed.gz.tbi
[2026-05-27T11:33:27.189105Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T11:33:27.202953Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T11:33:27.202979Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T11:33:27.202984Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T11:33:27.202988Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX2HtWNq'
[2026-05-27T11:33:27.202992Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T11:33:27.202997Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T11:33:27.203001Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T11:33:27.203004Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T11:33:27.203008Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T11:33:27.203012Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T11:33:27.203015Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T11:33:27.203019Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T11:33:27.203023Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T11:33:27.203867Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T11:33:27.203926Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T11:33:27.209912Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T11:33:27.210665Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T11:33:27.210811Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T11:33:27.211051Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T11:33:27.211314Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.211756Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.211850Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.211922Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.212043Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.212111Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.212237Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.212301Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.212672Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.212797Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.212896Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.213346Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.213551Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.215236Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.215628Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T11:33:27.215982Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216418Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216502Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216624Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216691Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216882Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.216949Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217059Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217125Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217234Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217299Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217429Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217529Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.217910Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218106Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218268Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218410Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218541Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218603Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218716Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218781Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218897Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.218963Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219075Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219164Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219650Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.219962Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220076Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220139Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220248Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220314Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220428Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220549Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220689Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220757Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220867Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.220933Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221218Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221662Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221778Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221842Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.221953Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222019Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222125Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222186Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222297Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222359Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222470Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222539Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222650Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.222812Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.223330Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.223393Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.223951Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.224018Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.224125Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.224188Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.224308Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.224447Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.225684Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.226375Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.226953Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227028Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227144Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227211Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227328Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227389Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227502Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227563Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227674Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227742Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.227868Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.228020Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.228771Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.228886Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.229059Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.229231Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.229434Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.229554Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.229777Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.229958Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.230324Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.231152Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.251718Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.252587Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.252814Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.253115Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.253236Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.253383Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.253604Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.253989Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.254288Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.255210Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T11:33:27.255351Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.255484Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T11:33:27.255815Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.256341Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.256934Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.257713Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.259064Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.260174Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.261432Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.267550Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T11:33:27.269737Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T11:33:27.272418Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T11:33:27.274724Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T11:33:27.278177Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T11:33:27.279573Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T11:33:27.282912Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T11:33:27.284397Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T11:33:27.347790Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.348112Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.348140Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.349037Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.349340Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.349728Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.354623Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T11:33:27.356741Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T11:33:27.358343Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T11:33:27.464544Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.465741Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:27.469124Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T11:33:28.282625Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.283812Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.287182Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T11:33:28.398750Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.399845Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.403243Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T11:33:28.416087Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.416174Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.417165Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.417446Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.421099Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T11:33:28.422250Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T11:33:28.449847Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.450943Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.453919Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T11:33:28.616012Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.617111Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.620167Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T11:33:28.731578Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.732759Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.736015Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T11:33:28.797302Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.798565Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.801338Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T11:33:28.862939Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.864102Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.867279Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T11:33:28.928622Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.929785Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.933103Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T11:33:28.994542Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.995654Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:28.999092Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T11:33:29.360676Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.361794Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.364973Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T11:33:29.426390Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.427509Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.431264Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T11:33:29.491679Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.492726Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.496167Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T11:33:29.658053Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.659391Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.662880Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T11:33:29.874540Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.875669Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.878855Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T11:33:29.883391Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.884353Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.887294Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T11:33:29.916671Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.917902Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.918381Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.921707Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.922287Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T11:33:29.924969Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T11:33:29.986216Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.987210Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:29.990775Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T11:33:30.052118Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.053150Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.056758Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T11:33:30.419403Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.420539Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.423964Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T11:33:30.436776Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.437722Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.441261Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T11:33:30.470410Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.471389Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.475087Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T11:33:30.536504Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.537547Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.540703Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T11:33:30.852713Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.853639Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.857247Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T11:33:30.918431Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.919762Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.923532Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T11:33:30.984585Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.986162Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T11:33:30.989708Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T11:33:31.050926Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.052185Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.055628Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T11:33:31.217051Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.218487Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.221818Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T11:33:31.383302Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.384930Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.388297Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T11:33:31.449697Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.450938Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.454157Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T11:33:31.515243Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.516653Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.519742Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T11:33:31.548804Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.549976Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.553098Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T11:33:31.582225Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.583915Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.584491Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.587477Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.588112Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T11:33:31.590932Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T11:33:31.651852Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.652834Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:31.656494Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T11:33:32.068612Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.069598Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.072743Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T11:33:32.133916Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.134900Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.137694Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T11:33:32.199340Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.200233Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.203345Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T11:33:32.315247Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.316218Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.319517Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T11:33:32.380845Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.381782Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.384948Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T11:33:32.446178Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.447141Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.450108Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T11:33:32.479349Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.480274Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.483613Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T11:33:32.594992Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.595883Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.599149Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T11:33:32.612061Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.612912Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.615892Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T11:33:32.645481Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.646340Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.649250Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T11:33:32.650196Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.650942Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.653536Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T11:33:32.682942Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.683033Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.683801Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.684083Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.687423Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T11:33:32.700733Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.701539Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.704357Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T11:33:32.765701Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.766524Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.769514Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T11:33:32.830719Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.831493Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.834667Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T11:33:32.864142Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.864982Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.868031Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T11:33:32.929229Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.930059Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.933584Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T11:33:32.994658Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.995489Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:32.998339Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T11:33:33.060294Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.061145Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.064244Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T11:33:33.077365Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.078184Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.080970Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T11:33:33.142638Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.143394Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.146667Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T11:33:33.258126Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.258907Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.262371Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T11:33:33.674348Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.675128Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.678280Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T11:33:33.739637Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.740433Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.743771Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T11:33:33.805184Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.805969Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:33.809147Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T11:33:34.020848Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.021620Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.024764Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T11:33:34.054280Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.054957Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.057992Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T11:33:34.119169Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.119918Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.122927Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T11:33:34.184265Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.184350Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.184997Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.185453Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.188342Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T11:33:34.216996Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T11:33:34.218484Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.218556Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.219247Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.219556Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.222743Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T11:33:34.223764Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T11:33:34.284083Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.284194Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.284814Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.285099Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.288417Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T11:33:34.289611Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T11:33:34.349652Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.350328Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.353247Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T11:33:34.414758Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.415440Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.418400Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T11:33:34.479590Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.480268Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.483191Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T11:33:34.544776Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.545426Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.548362Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T11:33:34.577605Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.578260Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.581359Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T11:33:34.642618Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.643273Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.646523Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T11:33:34.707838Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.708659Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.712038Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T11:33:34.772951Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.773050Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.773633Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.776469Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T11:33:34.805714Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.821729Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.822261Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:34.824897Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T11:33:34.854249Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.007635Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T11:33:35.018749Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.018821Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.019309Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.021925Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T11:33:35.051223Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.366266Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.366813Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.369473Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T11:33:35.398687Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.813762Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.814302Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T11:33:35.816677Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T11:33:35.846179Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.113405Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.113886Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.116690Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T11:33:42.178004Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.178324Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.178464Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.178750Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.179152Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.183272Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T11:33:42.184512Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T11:33:42.185461Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T11:33:42.211302Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.211356Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.211376Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.211544Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.211775Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.214075Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T11:33:42.215118Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T11:33:42.243589Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.243646Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.243813Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T11:33:42.246006Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T11:33:42.275918Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T11:33:46.198781Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T11:34:00.322790Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T11:34:00.322790Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] 
[2026-05-27T11:34:00.322790Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T11:34:00.322851Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] 
[2026-05-27T11:34:00.322859Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T11:34:00.322865Z] [nf-ed2308f3e945acb74c93e34bf86aa661-cec77-xpqzk] [609_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec