Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/ef0ce02e01365a2d36ec02a03a5e40/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/ef0ce02e01365a2d36ec02a03a5e40/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/a2ccef1525a551970c21f9713564f9/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/a2ccef1525a551970c21f9713564f9/Sig_18_Blood.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCv1zlG/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCv1zlG/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCv1zlG/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T15:31:40.963917Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T15:31:40.964594Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T15:31:40.964628Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T15:31:40.964655Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T15:31:40.964671Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXCv1zlG'
[2026-05-27T15:31:40.964707Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T15:31:40.964727Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T15:31:40.964747Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T15:31:40.964752Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] memMb: 1523801
[2026-05-27T15:31:40.964757Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T15:31:40.964762Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T15:31:40.964768Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T15:31:40.964773Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T15:31:40.964779Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T15:31:40.965222Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T15:31:40.965377Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T15:31:40.972246Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T15:31:40.972858Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T15:31:40.973160Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T15:31:40.973402Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T15:31:40.973591Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.974141Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.974770Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.974930Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.975147Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.975606Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.975937Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.976988Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.977297Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.977658Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T15:31:40.977813Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.978265Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.978414Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.978494Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.978634Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.978714Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.978849Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.978928Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.979066Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.979143Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.979444Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.979953Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980107Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980195Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980339Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980418Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980566Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980646Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980785Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.980867Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.981241Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.981616Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.981779Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.981857Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.981995Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.982072Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.982215Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.982296Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.982436Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.982514Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.982743Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.983214Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.983357Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.983450Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.983591Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.983669Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.983807Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.983888Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.984092Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.984173Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.984515Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.984935Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985070Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985147Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985282Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985358Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985494Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985574Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985704Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985786Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.985932Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.986564Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.986705Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.986789Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.986927Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987010Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987145Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987219Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987354Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987450Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987595Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987694Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.987963Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.988565Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.990096Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.990945Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991113Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991203Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991345Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991439Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991590Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991672Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991816Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.991897Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.992187Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.992914Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993063Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993150Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993285Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993363Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993506Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993587Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993721Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.993797Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.994138Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.994935Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995094Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995173Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995315Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995395Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995618Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995699Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995838Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.995968Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.996920Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.997004Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.997138Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.997226Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.997387Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.997467Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:40.999971Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.000141Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.001385Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.001481Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.016507Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.017335Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.017457Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.017616Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.018930Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.019009Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.019176Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.019540Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.019722Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.020225Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.020339Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.020773Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.021698Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.022107Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.022294Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.022802Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.023561Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.023937Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.024657Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T15:31:41.027243Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:41.031028Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:41.034065Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:41.035968Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:41.036373Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:41.042085Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:41.042487Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:41.043136Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:41.156960Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.158085Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.161153Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:42.073669Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.074907Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.077541Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:42.238928Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.240138Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.242830Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:42.454201Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.455368Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.458250Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:42.519429Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.520542Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.523822Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:42.552632Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.553753Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.556500Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:42.667617Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.668733Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.672110Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:42.833241Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.834543Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.837381Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:42.866471Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.867650Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.870389Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:42.931592Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.931676Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.932927Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.933191Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.936487Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:42.937497Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:42.997511Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.997588Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.997630Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.998811Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.999090Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.999583Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.002724Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:43.004614Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:43.005911Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:43.033118Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.034492Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.034791Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.038355Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.038975Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:43.041221Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:43.302832Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.304101Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.306800Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:43.335900Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.337076Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.339632Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:43.400843Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.401919Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.405403Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:43.466107Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.467190Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.470668Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:43.531165Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.532294Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.534715Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:43.596095Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.597141Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.599823Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:43.711076Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.712540Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.712821Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.715410Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.715736Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:43.718034Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:43.779411Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.779475Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.780457Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.780783Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.784274Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:43.785680Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:43.813600Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.814641Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.817625Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:43.878796Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.880017Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.882674Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:43.911794Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.912917Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.915636Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:44.127367Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.128549Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.131084Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:44.192352Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.193332Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.195983Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:44.557643Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.557718Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.558778Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.559063Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.561911Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.563558Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:44.564672Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:44.565687Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.565934Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.568734Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.569262Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:44.571816Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:44.600812Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.602070Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.602382Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.604706Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.604830Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:44.607158Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:44.636591Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.637703Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.637928Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.640331Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.640655Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:44.642703Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:44.672356Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.672436Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.673788Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.674098Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.677039Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:44.677684Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:44.839118Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.840203Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.843004Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:44.872095Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.873078Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.875735Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:45.137342Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.138380Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.141153Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:45.202311Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.203175Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.206032Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:45.517315Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.518210Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.520698Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:45.549881Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.550713Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.553769Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:45.664880Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.665872Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.668404Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:45.681541Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.682517Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.685094Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:45.714249Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.714302Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.714327Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.715191Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.715440Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.715776Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.719105Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:45.720963Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:45.722071Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:45.781310Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.781371Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.782215Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.782521Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.785365Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:45.786260Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:45.798603Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.799523Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.802546Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:45.815242Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.816039Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.818545Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:45.847830Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.848731Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.851099Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:45.864567Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.865433Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.868209Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:45.881123Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.881925Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.883719Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.884387Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:45.884839Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.887503Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:45.916636Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.917439Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.920104Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:45.949197Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.950052Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.952338Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:45.965758Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.966551Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.969369Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:45.982257Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.982305Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.983031Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.983329Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.986220Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:45.987455Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:46.015209Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.016312Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.016573Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.017700Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.020363Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:46.021443Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:46.081582Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.082332Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.084880Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:46.496631Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.497520Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.500594Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:46.611717Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.612508Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.615322Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:46.726551Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.727345Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.730368Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:46.743022Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.743815Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.747004Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:46.759478Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.760185Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.762756Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:46.791857Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.792546Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.794864Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:46.856339Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.857481Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.860651Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:47.021842Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.022768Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.025385Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:47.054518Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.055294Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.057837Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:47.087072Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.087840Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.090267Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:47.151650Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.152378Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.154811Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:47.184048Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.184753Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.187562Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:47.216678Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.217482Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.219921Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:47.233154Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.233845Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.236387Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:47.249531Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.250275Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.252875Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:47.265995Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.266720Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.269255Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:47.282286Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.282329Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.282918Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.283118Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.285559Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:47.286092Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:47.315209Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.315257Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.315839Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.316038Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.318495Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:47.319578Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:47.347934Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.348497Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.350810Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:47.380117Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.380690Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.382745Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:47.412275Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.412832Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.415046Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:47.444437Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.444476Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.445027Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.445220Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.448427Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:47.449510Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:47.477321Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.477913Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.480251Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:47.509534Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.510075Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.512451Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:47.541671Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.542208Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.544677Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:47.549760Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.550325Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.552572Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:47.581897Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.581938Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.582452Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.584787Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:47.646101Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.646624Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.648890Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:47.678198Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.678249Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.678754Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.681020Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:47.710341Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.974458Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.974936Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.977473Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:48.006660Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.006718Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.007270Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.009755Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:48.038854Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.303052Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.303629Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.305967Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:48.335273Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.399178Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.399712Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.401695Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:48.431317Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.595463Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.596046Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.598557Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:48.627746Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.628091Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.628222Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.628460Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.628729Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.632565Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T15:31:48.633713Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T15:31:48.634638Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T15:31:48.660713Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.660754Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.660778Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.660960Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.661182Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.663497Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T15:31:48.663879Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T15:31:48.693112Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.693148Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.693307Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.695163Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T15:31:48.724913Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:51.592445Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T15:31:59.852634Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T15:31:59.852634Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] 
[2026-05-27T15:31:59.852634Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T15:31:59.852695Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] 
[2026-05-27T15:31:59.852703Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T15:31:59.852711Z] [nf-d9ef0ce02e01365a2d36ec02a03a5e40-f262e-mccfg] [785_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec