Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/e1f6b97905bf8f3d6f3f16f72383f6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/e1f6b97905bf8f3d6f3f16f72383f6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/f87862858075b3153cce21cd92c399/positive_somatic_control_2.snv_indel.phased.vep.vcf.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot definitions
Processed 238 variants, labeled 0 as HOTSPOT