File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/5e66259769be3f051a5dd99d69e486/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v_lopcvw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 15:36:01,847 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 15:36:02,661 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 15:36:02,835 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 15:36:03,767 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 15:36:03,931 - cnv_pipe.batch.run_model - INFO - Processing cluster 926 with 192 probes
2026-05-27 15:36:04,301 - cnv_pipe.batch.run_model.cluster926 - INFO - Child process started for cluster 926 with 192 probes
2026-05-27 15:36:59,515 - cnv_pipe.batch.run_model.cluster926 - INFO - Child process finished cluster 926. Wrote cluster_926_samples.csv and cluster_926_params.csv
2026-05-27 15:36:59,516 - cnv_pipe.batch.run_model - INFO - Cluster 926 finished in 55.58 seconds. Status: SUCCESS