Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/b5cf793cbe520410c266d22fa43d76/HCC1395_tumor.recalibrated.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/0d1357e93cd9534b8b96eee6f3a91c/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/b5cf793cbe520410c266d22fa43d76/HCC1395_tumor.recalibrated.bam
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/0d1357e93cd9534b8b96eee6f3a91c/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXetMySW/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXetMySW/chr6_138229684-138229952.bed.gz.tbi
Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:
/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXetMySW/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T15:31:34.609360Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T15:31:34.615200Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T15:31:34.615223Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T15:31:34.615229Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T15:31:34.615233Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXetMySW'
[2026-05-27T15:31:34.615237Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T15:31:34.615242Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T15:31:34.615245Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T15:31:34.615249Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T15:31:34.615252Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T15:31:34.615256Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T15:31:34.615260Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T15:31:34.615263Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T15:31:34.615267Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T15:31:34.615978Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T15:31:34.616105Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T15:31:34.621740Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T15:31:34.622482Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T15:31:34.622654Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T15:31:34.622913Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T15:31:34.623163Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.623788Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.623878Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.623954Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.624072Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.624137Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.624578Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.624710Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.624955Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.625454Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.625758Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.627087Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.627529Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.627677Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T15:31:34.628143Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.628313Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.628616Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.628688Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.628807Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.628876Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.629060Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.629133Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.629247Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.629316Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.629429Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.629492Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.629711Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630008Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630122Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630189Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630299Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630365Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630485Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630548Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630658Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630725Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630834Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.630896Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631008Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631155Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631548Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631609Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631720Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631782Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631912Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.631975Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.632087Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.632199Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.632342Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.632421Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.632547Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.632636Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.632915Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633277Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633387Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633447Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633556Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633620Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633725Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633792Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633904Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.633963Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.634116Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.634179Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.634325Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.634831Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.634954Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.635015Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.635124Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.635192Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.635300Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.635366Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.635478Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.635539Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.636761Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.636919Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.637529Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.637599Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.637712Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.637778Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.637894Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.637956Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.638067Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.638130Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.638239Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.638307Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.638419Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.638561Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.639612Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.639727Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.639869Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.639942Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.640055Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.640121Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.640263Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.640341Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.640627Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641270Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641384Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641452Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641626Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641693Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641805Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641869Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.641978Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.642047Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.642153Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.642216Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.642437Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.643125Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.645101Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.645833Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.646786Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.646863Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.658988Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.659217Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.660189Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.660319Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.660416Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.660661Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.661032Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.661233Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.661628Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.662002Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.662620Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.663011Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.663821Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.665027Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.665317Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.666018Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:34.666225Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.667953Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T15:31:34.668940Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:34.670612Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.671604Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:34.674762Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:34.678413Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:34.682650Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:34.686115Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:34.686688Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:34.751056Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.751949Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:34.755792Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:35.367755Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.369017Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.371917Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:35.433368Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.434541Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.437648Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:35.599274Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.600491Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.603685Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:35.715046Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.716073Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.719218Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:35.780407Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.781550Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.784621Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:35.845748Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.846914Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.849558Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:35.878819Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.879865Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.882694Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:35.884338Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:35.887579Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.888488Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:35.891171Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:36.002945Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.004065Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.006943Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:36.036139Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.037265Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.040251Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:36.101472Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.102546Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.105182Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:36.134507Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.135513Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.138413Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:36.199752Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.200791Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.203551Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:36.264871Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.265938Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.268595Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:36.297906Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.298901Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.301859Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:36.413607Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.414702Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.417726Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:36.629345Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.630459Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.633129Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:37.045535Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.046689Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.049577Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:37.110744Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.111766Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.114467Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:37.143836Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.143900Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.143937Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.144839Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.145128Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.145435Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.148303Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:37.149845Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:37.150731Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:37.179510Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.179564Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.180410Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.180705Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.183530Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:37.184808Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:37.245195Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.245269Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.246154Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.246643Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.249518Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:37.250642Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:37.311123Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.312077Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.314454Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:37.344052Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.344983Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.347705Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:37.376942Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.377838Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.380580Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:37.409694Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.410549Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.412749Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:37.442412Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.442482Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.443297Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.443809Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.446268Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:37.447359Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:37.509103Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.509164Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.509191Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.510013Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.510256Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.510712Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.512874Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:37.514947Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.515780Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:37.517739Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.518108Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:37.520443Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:37.533520Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.534345Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.537107Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:37.542037Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.542825Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.545269Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:37.546748Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.547564Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.550340Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:37.551533Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.552234Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.554798Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:37.584109Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.584945Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.587565Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:37.588469Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.589161Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.591758Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:37.621306Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.622400Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.622718Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.625277Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.625516Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:37.628010Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:37.890169Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.891149Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.894057Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:37.923639Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.924613Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.927890Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:38.089036Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.089910Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.093021Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:38.121911Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.122848Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.125792Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:38.437734Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.438678Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.441576Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:38.470742Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.471633Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.474598Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:38.503724Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.504643Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.507572Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:38.568789Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.568891Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.569724Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.570126Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.573031Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:38.574436Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:38.602229Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.603018Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.605787Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:38.634851Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.634913Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.635680Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.636063Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.638954Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:38.639525Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:38.668807Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.668860Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.669582Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.669848Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.672764Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:38.686528Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.686591Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.687290Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.687693Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.690434Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:38.691309Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:38.698287Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:38.703389Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.703431Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.704050Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.704394Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.707458Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:38.708335Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:38.736706Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.737412Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.739928Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:38.769450Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.769522Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.769544Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.769575Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.770271Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.771676Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.773386Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:38.773791Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.774158Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.774596Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:38.777494Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:38.778278Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:38.806477Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.806550Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.806578Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.807277Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.807885Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.809558Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.810363Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:38.813222Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:38.813977Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:38.874541Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.874615Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.874641Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.875336Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.875817Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.876349Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.879587Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:38.881280Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:38.882077Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:38.894192Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.894863Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.897210Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:38.926656Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.926718Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.926738Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.927345Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.927664Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.928065Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.932865Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:38.933975Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:38.934976Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:39.143118Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.143879Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.146720Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:39.207938Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.208638Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.211163Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:39.240829Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.241516Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.244375Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:39.656584Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.657245Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.660311Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:39.673320Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.673975Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.676594Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:39.738016Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.738696Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.741440Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:39.770953Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.771011Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.771599Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.772239Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.774927Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:39.775991Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:39.804538Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.805233Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.807948Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:39.837274Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.837927Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.840620Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:39.869899Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.870547Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.873377Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:39.902595Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.903245Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.906217Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:40.017474Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.017573Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.017604Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.018191Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.019848Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.020724Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.021055Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:40.023830Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:40.049519Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:40.053651Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.053713Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.053737Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.054255Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.054663Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.055014Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.058444Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:40.058965Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:40.086645Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:40.087673Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.087749Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.088269Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.088616Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.091789Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:40.092725Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:40.104757Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.105283Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.107976Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:40.121330Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.153425Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.153493Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.153519Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.153977Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.154263Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.156784Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:40.157775Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:40.187519Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.187622Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.189126Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.189515Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.191828Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:40.205426Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.205919Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.208535Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:40.221868Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.237741Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.702813Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.703343Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.706031Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:40.735528Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.751361Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.751806Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.753995Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:40.815814Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.816101Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.816220Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.816593Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.817125Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.821275Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T15:31:40.822640Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T15:31:40.823284Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T15:31:40.850798Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.850846Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.850867Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.851035Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.851463Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.853972Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T15:31:40.854689Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T15:31:40.883474Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.883533Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.883706Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.885889Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T15:31:40.915767Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.240541Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T15:31:53.504254Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T15:31:53.504254Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner]
[2026-05-27T15:31:53.504254Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] workflow version: 2.9.10
[2026-05-27T15:31:53.504309Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner]
[2026-05-27T15:31:53.504317Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T15:31:53.504324Z] [nf-060d1357e93cd9534b8b96eee6f3a91c-23b27-q5tnn] [573_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec