[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXHHfCMf/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXHHfCMf/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXHHfCMf/chr4_22420786-22421189.bed.gz.tbi
[2026-05-27T15:31:36.645185Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T15:31:36.647038Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T15:31:36.647050Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T15:31:36.647054Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T15:31:36.647058Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXHHfCMf'
[2026-05-27T15:31:36.647062Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T15:31:36.647067Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T15:31:36.647070Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T15:31:36.647074Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T15:31:36.647077Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T15:31:36.647081Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T15:31:36.647085Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T15:31:36.647088Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T15:31:36.647092Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T15:31:36.647942Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T15:31:36.648057Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T15:31:36.653808Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T15:31:36.654468Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T15:31:36.654635Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T15:31:36.654852Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T15:31:36.654989Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.655696Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.655882Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.656145Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.656301Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.656572Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.657742Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.658174Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T15:31:36.658513Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.658805Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.658945Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659014Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659128Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659190Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659301Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659365Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659476Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659542Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659650Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659718Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.659834Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.660094Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.660568Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.660782Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.660893Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.660954Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661070Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661134Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661244Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661309Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661418Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661483Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661615Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661676Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.661874Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662152Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662260Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662324Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662431Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662498Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662649Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662716Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662834Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.662901Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.663014Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.663083Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.663255Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.663720Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.663907Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.663976Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664088Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664153Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664263Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664326Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664437Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664499Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664610Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664678Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.664838Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665371Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665483Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665543Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665652Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665715Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665820Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665886Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.665995Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.666058Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.666164Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.666229Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.666335Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.666431Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.666709Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.667222Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.668778Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.668912Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.669126Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.669706Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.669980Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.670511Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671176Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671240Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671358Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671420Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671530Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671619Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671727Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671796Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671910Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.671973Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.672107Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.672308Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.672947Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.673009Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.673117Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.673180Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.689231Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.689649Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.689744Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.689918Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.690801Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.690937Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.691250Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.691567Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.691978Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.692381Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.692650Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.693156Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.693428Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.694702Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.694869Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.695383Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:36.696173Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.696375Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T15:31:36.697571Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.699936Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-05-27T15:31:36.703692Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T15:31:36.706511Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T15:31:36.708794Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T15:31:36.709775Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-05-27T15:31:36.712894Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-05-27T15:31:36.714845Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T15:31:36.715599Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:36.829448Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.830398Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.833440Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-05-27T15:31:36.862483Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.863571Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:36.866247Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:37.128262Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.129326Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.132055Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:37.494092Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.495156Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.497890Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-05-27T15:31:37.559247Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.560658Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.563624Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T15:31:37.725129Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.726351Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.729334Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-05-27T15:31:37.990923Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.991005Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.991945Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.992271Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.995419Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T15:31:37.996516Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:38.024550Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.025497Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.028049Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-05-27T15:31:38.057574Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.058525Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.061432Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T15:31:38.172703Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.173797Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.176927Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:38.189705Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.190543Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.193164Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T15:31:38.222684Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.223654Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.226387Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T15:31:38.438121Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.439170Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.441990Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-05-27T15:31:38.553564Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.554527Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.557375Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:38.562289Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.563101Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.566029Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-05-27T15:31:38.627119Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.628071Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.631085Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:38.742300Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.743335Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.746386Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T15:31:38.958066Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.959051Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.961839Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-05-27T15:31:38.992264Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.993142Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.995811Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-05-27T15:31:39.025491Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.026373Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.029042Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T15:31:39.090412Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.091371Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.094268Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T15:31:39.123451Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.124332Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.127172Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:39.389116Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.390072Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.393108Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-05-27T15:31:39.406121Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.406998Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.409831Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:39.438875Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.439667Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.442184Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-05-27T15:31:39.471561Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.472724Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.472978Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.475152Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.475627Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:39.478295Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:39.507452Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.507521Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.508290Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.508525Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.511409Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:39.512142Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-05-27T15:31:39.540703Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.541760Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.542050Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.544444Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.544921Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-05-27T15:31:39.546877Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-05-27T15:31:39.577548Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.577625Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.578339Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.578736Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.581270Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T15:31:39.583147Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-05-27T15:31:39.610689Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.611482Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.613986Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:39.725501Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.726350Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.729125Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-05-27T15:31:39.758442Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.759326Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.761986Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:39.923940Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.924797Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.927456Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:39.956783Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.957610Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.960097Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T15:31:39.989463Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.990255Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.992946Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T15:31:40.022149Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.022934Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.025223Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-05-27T15:31:40.054745Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.055761Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.058452Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-05-27T15:31:40.071633Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.072405Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.074878Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-05-27T15:31:40.088126Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.088836Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.091601Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-05-27T15:31:40.104706Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.105395Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.107702Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:40.138403Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.139121Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.141443Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T15:31:40.171054Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.171734Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.174245Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-05-27T15:31:40.203664Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.204338Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.206933Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T15:31:40.368786Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.369561Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.372549Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T15:31:40.401703Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.402416Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.405327Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:40.516635Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.516721Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.517429Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.518271Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.520823Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T15:31:40.521913Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-05-27T15:31:40.682771Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.683578Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.686432Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T15:31:40.715529Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.716317Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.719127Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T15:31:40.723992Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.724631Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.727316Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:40.756832Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.757531Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.760186Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-05-27T15:31:40.773383Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.774018Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.776411Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T15:31:40.789780Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.790415Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.792886Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:40.798155Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.798751Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.801369Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-05-27T15:31:40.830570Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.830674Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.830700Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.831297Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.831575Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.831890Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.834810Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T15:31:40.836198Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:40.837177Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:40.864431Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.865070Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.867073Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.867715Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.867930Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T15:31:40.870302Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T15:31:40.899625Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.900241Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.902789Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T15:31:41.114566Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.115307Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.118191Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-05-27T15:31:41.379757Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.379827Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.379850Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.379874Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.380457Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.380958Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382785Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.384159Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.384662Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T15:31:41.385080Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T15:31:41.387406Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:41.388659Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:41.416838Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.417367Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.419649Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T15:31:41.420072Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.420139Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.420577Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.421005Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.423595Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:41.424176Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:41.453424Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.453494Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.453523Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.454210Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.454469Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.454973Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.457869Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-05-27T15:31:41.459294Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-05-27T15:31:41.460135Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:41.519564Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.520269Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.522865Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:41.552180Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.552731Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.555524Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T15:31:41.666684Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.667184Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.669703Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-05-27T15:31:41.699286Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.699780Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.702142Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T15:31:41.731646Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.731725Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.732162Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.734648Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-05-27T15:31:41.747902Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.748361Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.750889Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T15:31:41.764276Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.764336Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.764763Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.767168Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:41.780902Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.796692Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.512176Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.512636Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.515031Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T15:31:42.544614Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.809181Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.809623Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.812049Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-05-27T15:31:42.841456Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.005595Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.006016Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.008296Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:43.037878Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.037936Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.038323Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.040336Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:43.070238Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.070497Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.070621Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.070938Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.071232Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.075162Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T15:31:43.076173Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T15:31:43.076857Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T15:31:43.103708Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.103766Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.103788Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.103997Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.104220Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.106155Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T15:31:43.106994Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T15:31:43.136470Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.136536Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.136695Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.138888Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T15:31:43.168723Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.243980Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T15:31:55.537469Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T15:31:55.537469Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] 
[2026-05-27T15:31:55.537469Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T15:31:55.537537Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] 
[2026-05-27T15:31:55.537545Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T15:31:55.537552Z] [nf-af7cae4f3c908dc1acf5da1aa94f2786-cda37-fbmmw] [581_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec