File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/2960592c319d91469d2fb557b13009/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-62zj7k37 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 15:36:09,425 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 15:36:10,205 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 15:36:10,373 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 15:36:11,276 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 15:36:11,351 - cnv_pipe.batch.run_model - INFO - Processing cluster 972 with 173 probes
2026-05-27 15:36:11,826 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process started for cluster 972 with 173 probes
2026-05-27 15:37:01,886 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process finished cluster 972. Wrote cluster_972_samples.csv and cluster_972_params.csv
2026-05-27 15:37:01,887 - cnv_pipe.batch.run_model - INFO - Cluster 972 finished in 50.54 seconds. Status: SUCCESS