Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/504d80d3c785555bd86b21f1e38f54/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/504d80d3c785555bd86b21f1e38f54/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/a2ccef1525a551970c21f9713564f9/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/a2ccef1525a551970c21f9713564f9/Sig_18_Blood.recalibrated.bam
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-05-27T15:31:41.339469Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T15:31:41.340852Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T15:31:41.340863Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T15:31:41.340868Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T15:31:41.340872Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXinL9LQ'
[2026-05-27T15:31:41.340875Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T15:31:41.340880Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T15:31:41.340884Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T15:31:41.340887Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T15:31:41.340891Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T15:31:41.340894Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T15:31:41.340898Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T15:31:41.340902Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T15:31:41.340906Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T15:31:41.341875Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T15:31:41.341960Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T15:31:41.347709Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T15:31:41.348381Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T15:31:41.348546Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T15:31:41.348767Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T15:31:41.349043Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.349510Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.349603Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.349677Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.349795Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.349863Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.349988Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.350052Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.350484Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.350637Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.350739Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.351306Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.351555Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.353165Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.353729Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.353930Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T15:31:41.354204Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.354477Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.354604Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.354671Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.354883Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.354956Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355070Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355138Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355248Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355311Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355429Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355623Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355916Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.355988Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356097Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356166Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356289Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356350Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356459Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356521Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356636Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356700Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356827Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.356914Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.357125Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.357489Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.357630Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.357693Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.357803Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.357864Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.357978Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.358092Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.358212Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.358282Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.358392Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.358455Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.358710Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359065Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359176Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359238Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359349Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359415Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359520Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359583Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359693Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359753Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359875Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.359938Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.360043Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.360125Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.360314Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.360832Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.361409Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.361476Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.361588Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.361654Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.361767Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.361885Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.363558Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.363627Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.363739Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.363805Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.363911Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.363975Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.364085Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.364149Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.364266Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.364328Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.364438Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.364594Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365277Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365351Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365461Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365527Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365636Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365701Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365809Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365872Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.365983Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.366045Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.366458Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.367045Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.381459Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382136Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382221Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382470Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382545Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382672Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382747Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382882Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382949Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.382995Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T15:31:41.387068Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.387822Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.388264Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.388659Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.389985Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.390570Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T15:31:41.390888Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.391681Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.392786Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.394223Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.398711Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T15:31:41.399600Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T15:31:41.403741Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T15:31:41.406785Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T15:31:41.407858Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T15:31:41.408219Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T15:31:41.408828Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T15:31:41.459739Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.459818Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.460686Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.461103Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.466364Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T15:31:41.467470Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T15:31:41.479400Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.480240Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.483216Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T15:31:41.794930Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.795986Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.799059Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T15:31:42.161022Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.162076Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.165088Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T15:31:42.226410Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.227406Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.230380Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T15:31:42.291699Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.291787Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.292764Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.293118Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.295992Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T15:31:42.296918Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T15:31:42.325325Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.325393Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.326274Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.326888Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.330254Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T15:31:42.331357Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T15:31:42.360861Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.360941Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.361820Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.362100Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.364880Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T15:31:42.366034Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T15:31:42.394213Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.395022Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.397574Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T15:31:42.398875Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.399672Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.402321Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T15:31:42.407376Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.408149Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.410523Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T15:31:42.416188Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.416981Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.419396Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T15:31:42.433054Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.433840Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.436281Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T15:31:42.441560Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.442337Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.444838Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T15:31:42.445825Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.446526Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.449172Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T15:31:42.478458Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.479236Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.481617Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T15:31:42.593273Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.594209Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.597132Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T15:31:42.626451Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.627346Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.630122Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T15:31:42.691529Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.692439Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.695139Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T15:31:42.724431Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.725345Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.728206Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T15:31:42.757332Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.758243Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.761074Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T15:31:42.790214Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.791104Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.794236Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T15:31:42.823471Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.824360Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.827210Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T15:31:42.856628Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.857576Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.860259Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T15:31:42.889546Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.890439Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.893239Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T15:31:42.922477Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.923408Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.926645Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T15:31:42.955653Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.956505Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.959095Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T15:31:42.988452Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.989325Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.992098Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T15:31:43.354505Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.355407Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.358345Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T15:31:43.570442Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.571307Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.574217Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T15:31:43.603466Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.604289Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.607026Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T15:31:43.636645Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.637464Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.640060Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T15:31:43.801795Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.802696Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.805437Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T15:31:43.834613Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.835382Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.838283Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T15:31:43.867488Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.868275Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.870904Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T15:31:43.900339Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.901109Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.903835Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T15:31:43.933245Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.933982Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.936487Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T15:31:43.965811Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.966504Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.969194Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T15:31:43.974184Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.974880Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.977604Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T15:31:44.189732Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.190528Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.193626Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T15:31:44.222562Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.223384Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.226446Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T15:31:44.387855Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.388674Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.391545Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T15:31:44.421932Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.422697Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.425705Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T15:31:44.787849Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.788622Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.791391Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T15:31:44.804965Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.805632Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.808145Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T15:31:44.869675Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.869757Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.869782Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.870449Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.870694Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.871208Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.873929Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T15:31:44.875329Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T15:31:44.876200Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T15:31:44.904875Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.904940Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.904961Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.905576Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.905950Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.906399Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.909661Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T15:31:44.911194Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T15:31:44.912081Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T15:31:44.938815Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.939441Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.941966Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T15:31:44.971378Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.972001Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.974620Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T15:31:45.003944Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.004562Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.007297Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T15:31:45.008259Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.008960Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.011506Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T15:31:45.040830Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.041438Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.044235Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T15:31:45.105399Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.106063Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.108825Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T15:31:45.137970Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.138648Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.141261Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T15:31:45.170586Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.171214Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.173938Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T15:31:45.203467Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.204087Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.206660Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T15:31:45.236336Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.236990Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.239320Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T15:31:45.268934Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.269558Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.272223Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T15:31:45.333521Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.334116Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.336824Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T15:31:45.398244Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.398888Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.401493Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T15:31:45.463110Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.463770Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.466544Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T15:31:45.928821Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.929490Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.932207Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T15:31:45.961580Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.962174Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.964816Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T15:31:45.994099Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.994698Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.997586Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T15:31:46.059062Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.059688Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.062529Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T15:31:46.091711Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.092288Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.094848Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T15:31:46.124491Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.125084Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.127497Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T15:31:46.157175Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.157769Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.160359Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T15:31:46.161538Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.162050Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.164447Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T15:31:46.169853Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.170369Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.172881Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T15:31:46.202325Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.202392Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.202415Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.202962Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.203456Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.203773Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.206947Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T15:31:46.208951Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T15:31:46.209804Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T15:31:46.237294Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.237359Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.237382Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.237846Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.238250Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.238612Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.242028Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T15:31:46.242447Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T15:31:46.268908Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T15:31:46.271029Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.271092Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.274708Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.438939Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.439375Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.441735Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T15:31:46.471462Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.735901Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.736337Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.739415Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T15:31:46.768424Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.433833Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.434267Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.436747Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T15:31:47.467198Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.433411Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.433833Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:48.436322Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T15:31:48.465939Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.730887Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.731322Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.733779Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T15:31:53.763224Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.763513Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.763629Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.763925Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.764335Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.766643Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T15:31:53.768601Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T15:31:53.769401Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T15:31:53.796849Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.796907Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.796929Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.797100Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.797334Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.799674Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T15:31:53.824375Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T15:31:53.829513Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.829566Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.829726Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:53.831701Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T15:31:53.861567Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:32:00.279055Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T15:32:14.460283Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T15:32:14.460283Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] 
[2026-05-27T15:32:14.460283Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T15:32:14.460331Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] 
[2026-05-27T15:32:14.460337Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T15:32:14.460344Z] [nf-5d504d80d3c785555bd86b21f1e38f54-865a9-tfx7h] [567_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec