.command.log - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr6_138229684-138229952.bed)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/5152369001ecd11b02c4b812517e6c/.command.log
Size: 102.5 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr6_138229684-138229952.bed)
Attempt
Content

  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/5152369001ecd11b02c4b812517e6c/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/d54d2fb39c519061fb552078378c6f/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/d54d2fb39c519061fb552078378c6f/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/5152369001ecd11b02c4b812517e6c/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX0HdbaC/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX0HdbaC/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX0HdbaC/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T15:31:37.190465Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T15:31:37.199335Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T15:31:37.199352Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T15:31:37.199359Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T15:31:37.199365Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX0HdbaC'
[2026-05-27T15:31:37.199370Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T15:31:37.199376Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T15:31:37.199381Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T15:31:37.199388Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] memMb: 1523801
[2026-05-27T15:31:37.199393Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T15:31:37.199398Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T15:31:37.199403Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T15:31:37.199408Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T15:31:37.199413Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T15:31:37.199765Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T15:31:37.199857Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T15:31:37.206681Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T15:31:37.207330Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T15:31:37.207478Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T15:31:37.207688Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T15:31:37.207867Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.208482Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.208592Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.208683Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.208974Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.209223Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.209397Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.209538Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.209715Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.210405Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.210618Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.212310Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.212818Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T15:31:37.212870Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.213366Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.213495Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.213646Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.213731Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.213873Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.213950Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.214232Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.214372Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.214791Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.215124Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.215486Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.215899Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216055Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216139Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216275Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216359Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216500Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216645Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216804Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.216883Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.217322Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.217652Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.217963Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.218327Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.218469Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.218547Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.218689Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.218766Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.218906Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.218984Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.219116Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.219196Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.219447Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.219874Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.220368Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.220480Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.220693Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.220777Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.220917Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.221011Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.221201Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.221317Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.221660Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222155Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222296Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222378Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222550Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222626Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222767Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222848Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.222984Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.223068Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.223338Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.223962Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.224307Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.225019Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.225183Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.225267Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.225405Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.225485Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.226989Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.227816Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.228083Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.228201Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.228370Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.228470Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.228685Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.228831Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.229725Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.229846Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.229992Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.230077Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.230226Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.230321Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.230457Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.230536Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.230751Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.231688Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.231846Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.231929Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.232075Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.232187Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.232366Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.232470Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.232632Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.232799Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.233927Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.234016Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.234159Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.234239Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.234378Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.234462Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.234594Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.234674Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.235098Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.235974Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.238454Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.239665Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.240139Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.240291Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.241230Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.245304Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.256187Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.256540Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.256690Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.256863Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.257588Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.257785Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.258052Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.258412Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.258758Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.259217Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.259771Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.260130Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.260869Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.261039Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.261629Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:37.261945Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:37.264512Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T15:31:37.264895Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:37.268240Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:37.272534Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:37.273960Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:37.276059Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:37.279482Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:38.045214Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.046449Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.049425Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:38.210487Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.211903Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.214560Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:38.227608Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.228824Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.231658Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:38.492859Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.494014Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.496681Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:38.525818Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.526954Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.530092Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:38.641188Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.641251Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.642474Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.642774Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.646731Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:38.647996Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:38.782564Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:38.783007Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:38.806987Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.807049Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.808243Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.808500Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.811328Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:38.812359Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:38.840473Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.841555Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.844166Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:38.873206Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.873254Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.874310Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.874542Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.877216Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:38.878188Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:38.906550Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.907600Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.910019Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:38.939254Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.940312Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:38.943396Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:39.004298Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.005416Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.008066Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:39.119222Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.119270Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.120344Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.120640Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.124163Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:39.183785Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:39.185255Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.185328Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.186400Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.186641Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.189860Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:39.190898Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:39.250900Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.251889Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.254045Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:39.283515Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.284481Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.286530Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:39.316092Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.317055Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.319215Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:39.348648Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.349637Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.352168Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:39.353114Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.354083Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.356305Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:39.417773Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.418730Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.420912Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:39.450316Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.451258Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.453438Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:39.915576Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.916731Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.919441Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:39.948456Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.949464Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.952188Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:39.965200Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.966183Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.968662Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:39.997906Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.997978Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.998897Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:39.999195Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.002539Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:40.003813Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:40.031210Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.032236Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.034930Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:40.096113Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.097130Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.099681Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:40.128888Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.129900Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.132540Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:40.161605Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.162502Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.164986Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:40.194281Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.195174Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.197795Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:40.226915Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.227884Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.230586Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:40.259560Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.260445Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.263063Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:40.324376Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.325329Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.327835Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:40.357023Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.357899Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.360450Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:40.421608Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.422494Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.425078Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:40.454260Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.454327Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.455219Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.455442Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.458480Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:40.459735Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:40.487439Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.488457Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.491652Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:40.552566Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.553502Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.556262Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:40.767524Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.768400Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.771008Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:40.800022Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.800861Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.803076Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:40.832453Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.833261Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.835462Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:40.864879Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.865673Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:40.868010Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:41.029527Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.029578Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.030401Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.030615Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.033945Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:41.035147Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:41.094890Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095782Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.098475Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:41.127490Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.128289Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.131033Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:41.160068Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.160139Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.160959Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.161239Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.164483Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:41.165611Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:41.225341Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.226233Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.229034Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:41.258078Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.258939Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.261647Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:41.473161Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.474111Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.477167Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:41.538157Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.538219Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.539064Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.539394Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.542605Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:41.543669Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:41.571505Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.572596Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.572913Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.573314Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.575818Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.576150Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.576847Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:41.579824Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:41.582109Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:41.612962Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.613028Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.613786Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.614060Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.617735Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:41.618970Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:41.646533Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.647719Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.648033Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.649244Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.652930Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:41.682645Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.683460Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.686330Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:41.747246Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.748064Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.751100Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:42.112781Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.113683Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.116375Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:42.477955Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.478741Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.481847Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:42.510838Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.511668Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.514462Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:42.675824Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.676597Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.679619Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:43.091261Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.092119Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.095460Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:43.122947Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:43.124153Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.124214Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.124946Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.125249Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.128805Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:43.129926Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:43.157509Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.158270Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.161427Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:43.190183Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.190922Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.193762Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:43.255007Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.255882Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.258636Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:43.319631Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.320362Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.323443Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:43.327994Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.328743Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.331926Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:43.392701Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.392775Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.392805Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.393553Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.393779Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.394121Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.397070Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:43.398125Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:43.399059Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:43.458264Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.458327Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.458348Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.459000Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.459212Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.459680Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.463613Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:43.464951Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:43.466024Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:43.524123Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.524204Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.524843Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.525031Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.527798Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:43.528268Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:43.588859Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.588917Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.589570Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.589922Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.593417Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:43.594606Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:43.622315Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.623021Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.626191Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:43.687102Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.687168Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.687833Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.688115Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.691326Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:43.692569Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:43.752208Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.752276Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.752859Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.753133Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.756942Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:43.792842Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:43.817443Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.817494Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.818057Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.818321Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.821764Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:43.822674Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:43.850673Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.882566Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.883085Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.885505Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:43.898649Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.899207Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.901590Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:43.914792Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.930524Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.395025Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.395102Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.395669Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.395920Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.398702Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:44.399446Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:44.427799Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.429349Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.743569Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.744159Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.746986Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:44.776153Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.840167Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.840709Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.843219Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:44.904505Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.018509Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.019019Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.021609Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:45.050710Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.051012Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.051114Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.051317Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.051761Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.055249Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T15:31:45.056647Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T15:31:45.057648Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T15:31:45.083747Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.083865Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.084065Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.084245Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.084622Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.086939Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T15:31:45.087263Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T15:31:45.116578Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.116616Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.116772Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.119512Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T15:31:45.148569Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.815681Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T15:31:56.087095Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T15:31:56.087095Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] 
[2026-05-27T15:31:56.087095Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T15:31:56.087149Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] 
[2026-05-27T15:31:56.087157Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T15:31:56.087165Z] [nf-385152369001ecd11b02c4b812517e6c-22d9c-lpczj] [768_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec