Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/a9745e541b6f373db09df10139f1d7/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/a4798a32f5e9daf45b045790a1d26d/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/a4798a32f5e9daf45b045790a1d26d/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/a9745e541b6f373db09df10139f1d7/.command.run
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCVWoq3/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCVWoq3/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXCVWoq3/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T15:31:41.067266Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T15:31:41.067850Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T15:31:41.067858Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T15:31:41.067863Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T15:31:41.067867Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXCVWoq3'
[2026-05-27T15:31:41.067871Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T15:31:41.067876Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T15:31:41.067883Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T15:31:41.067887Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T15:31:41.067892Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T15:31:41.067895Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T15:31:41.067900Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T15:31:41.067904Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T15:31:41.067907Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T15:31:41.068526Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T15:31:41.068593Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T15:31:41.074700Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T15:31:41.075396Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T15:31:41.075613Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T15:31:41.075845Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T15:31:41.076100Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.076670Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.076768Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.076840Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.076957Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.077023Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.077140Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.077390Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.077768Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.077832Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.077962Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.078611Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.078907Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.079594Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.080428Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.080829Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T15:31:41.081280Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.081491Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.081851Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.082042Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.082418Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.082667Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.082983Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083052Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083163Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083227Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083342Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083406Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083518Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083584Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083694Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083784Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.083900Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084006Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084391Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084454Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084588Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084656Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084769Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084830Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.084940Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.085004Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.085114Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.085178Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.085283Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.085354Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.085654Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086118Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086233Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086325Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086458Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086529Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086646Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086706Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086815Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086877Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.086984Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.087048Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.087376Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.087795Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.087910Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.087970Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088080Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088143Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088250Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088317Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088426Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088500Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088618Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088686Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088802Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.088927Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.089220Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.089713Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091325Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091388Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091499Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091561Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091668Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091729Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091834Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.091895Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.092002Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.092063Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.092169Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.092232Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.092367Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.092619Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093282Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093348Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093462Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093529Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093634Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093695Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093803Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093867Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.093979Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.094040Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.094149Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.094214Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.094435Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095148Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095263Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095329Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095437Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095503Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095610Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095673Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095780Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.095845Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.098224Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.098893Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.099150Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.099215Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.112364Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.113083Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.113254Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.113393Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.114497Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.114524Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.114650Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.114833Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.115087Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.115290Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.115721Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.116440Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.117071Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T15:31:41.117293Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.117903Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T15:31:41.118120Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.119258Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.121222Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.122014Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:41.122834Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.127192Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:41.129883Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:41.135147Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:41.140308Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:41.140676Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:41.142332Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:41.142556Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:41.206530Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.206600Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.206620Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.207501Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.207760Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.208564Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.213437Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:41.214727Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:41.216340Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:41.275485Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.276684Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.279809Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:41.942540Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.943742Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:41.946900Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:42.108278Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.108381Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.109539Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.109843Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.113524Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:42.114380Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:42.224844Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.226012Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.229100Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:42.233970Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.235492Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.238511Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:42.299658Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.301152Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.304080Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:42.365159Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.366670Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.369489Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:42.430870Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.432287Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.434854Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T15:31:42.464368Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.465780Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.468437Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:42.579927Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.581044Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.584053Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T15:31:42.613124Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.614103Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.616727Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:42.678113Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.679099Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.681915Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:42.843581Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.843649Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.844625Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.844909Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.848395Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T15:31:42.849493Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:42.877628Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.878688Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.881301Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:42.886336Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.887292Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.889880Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T15:31:42.903302Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.904247Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.906853Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:42.920042Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.921016Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.923500Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T15:31:42.953188Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.954180Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.957159Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T15:31:42.986159Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.987229Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:42.989978Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:43.101419Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.102478Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.105338Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T15:31:43.166668Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.167711Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.170755Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:43.282030Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.283110Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.286135Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:43.347393Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.348375Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.351066Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:43.614419Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.615499Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.618376Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T15:31:43.647377Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.648716Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.649001Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.651515Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.651943Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:43.654145Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:43.715692Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.715760Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.716764Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.717084Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.719897Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T15:31:43.751165Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T15:31:43.781772Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.781845Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.782676Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.783001Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.785813Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T15:31:43.787176Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:43.847442Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.848341Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.850959Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:43.880281Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.881164Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.883739Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:43.945301Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.945373Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.946256Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.946657Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.949663Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T15:31:43.950424Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T15:31:43.979673Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.979738Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.980610Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.980909Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:43.984159Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:43.984828Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:44.297027Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.298089Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.301122Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T15:31:44.362341Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.362434Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.362465Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.363423Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.363750Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.364172Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.368255Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T15:31:44.369629Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:44.396991Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.397942Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.400537Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:44.419641Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:44.429886Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.429972Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.430860Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.431130Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.433884Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T15:31:44.434920Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:44.463369Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.464330Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.467089Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:44.729353Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.730429Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.733646Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T15:31:44.794840Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.795874Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.798982Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T15:31:44.803819Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.804699Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.807224Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T15:31:44.836740Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.836830Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.837777Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.838110Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.840731Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T15:31:44.869836Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T15:31:44.870876Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.870956Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.871841Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.872103Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.874620Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T15:31:44.875684Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T15:31:44.904054Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.904136Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.904988Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.905339Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.908202Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T15:31:44.909584Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:44.937617Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.937712Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.938534Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.938800Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.941794Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:44.942549Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T15:31:44.970999Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.971091Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.971880Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.972168Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:44.974809Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T15:31:44.975589Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:45.004331Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.005220Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.007837Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:45.069515Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.070409Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.073047Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:45.086281Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.087176Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.089614Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T15:31:45.119218Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.120058Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.122735Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:45.335122Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.336054Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.338998Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T15:31:45.352195Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.353019Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.355532Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T15:31:45.368917Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.369680Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.372121Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T15:31:45.385489Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.386224Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.388616Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:45.402135Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.402863Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.405291Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T15:31:45.435027Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.435793Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.438424Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T15:31:45.467938Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.468017Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.468782Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.469084Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.471651Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T15:31:45.472474Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:45.501815Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.501900Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.502584Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.502926Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.505685Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T15:31:45.506157Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T15:31:45.535471Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.535559Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.536223Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.536541Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.538992Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T15:31:45.540000Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T15:31:45.568787Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.568874Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.569524Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.569808Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.572706Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:45.573854Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:45.634013Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.634750Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.637336Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T15:31:45.666679Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.667389Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.669965Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:45.881893Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.882671Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.885527Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T15:31:45.914931Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.915658Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.918518Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:45.979687Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.980411Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T15:31:45.982871Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T15:31:46.012421Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.012550Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.013206Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.013634Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.016304Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T15:31:46.017271Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T15:31:46.045739Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.045832Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.046543Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.046867Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.049753Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T15:31:46.050796Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.051094Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:46.051586Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.053533Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T15:31:46.083313Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.083399Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.083912Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.084229Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.086999Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:46.087767Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T15:31:46.116493Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.117139Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.119643Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:46.181358Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.182068Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.184511Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T15:31:46.213974Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.214658Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.217287Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:46.278869Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.279572Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.282329Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T15:31:46.311589Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.312245Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.315094Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:46.344542Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.345209Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.347570Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T15:31:46.409274Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.574054Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.574669Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.577832Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T15:31:46.606902Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.671259Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.672078Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.674664Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T15:31:46.704078Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.768382Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.768917Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.771247Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T15:31:46.800918Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.801001Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.801498Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.803819Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T15:31:46.833412Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.997892Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:46.998378Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.000794Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T15:31:47.030491Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.038228Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.038682Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.040739Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T15:31:47.071490Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.103433Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.103892Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.106190Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T15:31:47.135708Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.136026Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.136162Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.136568Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.137010Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.141034Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T15:31:47.142145Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T15:31:47.143039Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T15:31:47.169106Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.169173Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.169196Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.169408Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.169643Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.172185Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T15:31:47.172603Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T15:31:47.202156Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.202232Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.202428Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T15:31:47.204539Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T15:31:47.234320Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T15:31:51.709192Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T15:31:59.957085Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T15:31:59.957085Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] 
[2026-05-27T15:31:59.957085Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T15:31:59.957142Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] 
[2026-05-27T15:31:59.957149Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T15:31:59.957154Z] [nf-63a9745e541b6f373db09df10139f1d7-d80b1-h57w7] [576_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec