File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/59151d848e2bf24342dda529b19f56/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ii581dqi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 15:36:15,969 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 15:36:16,752 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 15:36:16,919 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 15:36:17,824 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 15:36:17,989 - cnv_pipe.batch.run_model - INFO - Processing cluster 1011 with 191 probes
2026-05-27 15:36:18,358 - cnv_pipe.batch.run_model.cluster1011 - INFO - Child process started for cluster 1011 with 191 probes
2026-05-27 15:37:14,229 - cnv_pipe.batch.run_model.cluster1011 - INFO - Child process finished cluster 1011. Wrote cluster_1011_samples.csv and cluster_1011_params.csv
2026-05-27 15:37:14,231 - cnv_pipe.batch.run_model - INFO - Cluster 1011 finished in 56.24 seconds. Status: SUCCESS