File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/5a4b5b6b7981964291bfb9f83f617e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i18sa3kc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 15:36:16,256 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 15:36:17,030 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 15:36:17,195 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 15:36:18,161 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 15:36:18,239 - cnv_pipe.batch.run_model - INFO - Processing cluster 1014 with 175 probes
2026-05-27 15:36:18,610 - cnv_pipe.batch.run_model.cluster1014 - INFO - Child process started for cluster 1014 with 175 probes
2026-05-27 15:37:08,657 - cnv_pipe.batch.run_model.cluster1014 - INFO - Child process finished cluster 1014. Wrote cluster_1014_samples.csv and cluster_1014_params.csv
2026-05-27 15:37:08,658 - cnv_pipe.batch.run_model - INFO - Cluster 1014 finished in 50.42 seconds. Status: SUCCESS