Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/76df9a45c7bae8051c8b51b6d5905e/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/2d238af3a414e00289f756be906e2e/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/2d238af3a414e00289f756be906e2e/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/76df9a45c7bae8051c8b51b6d5905e/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXbBJpYG/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXbBJpYG/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXbBJpYG/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T17:56:06.272628Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T17:56:06.275871Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T17:56:06.275895Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T17:56:06.275903Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T17:56:06.275909Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXbBJpYG'
[2026-05-27T17:56:06.275916Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T17:56:06.275925Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T17:56:06.275930Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T17:56:06.275937Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] memMb: 1015785
[2026-05-27T17:56:06.275942Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T17:56:06.275947Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T17:56:06.275954Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T17:56:06.275960Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T17:56:06.275965Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T17:56:06.276732Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T17:56:06.276820Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T17:56:06.284392Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T17:56:06.285076Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T17:56:06.285172Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T17:56:06.285458Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T17:56:06.285601Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.286223Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.286334Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.286428Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.286710Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.286950Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.287122Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.287281Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.287594Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.288097Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.288280Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.288599Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.288786Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.290505Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.291046Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.291348Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T17:56:06.291500Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.291613Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.291773Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.291914Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.292416Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.292510Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.292658Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.292748Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.292896Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.292979Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.293129Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.293215Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.293370Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.293504Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294170Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294261Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294428Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294511Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294657Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294744Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294889Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.294975Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.295131Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.295263Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.295964Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.296366Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.296519Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.296605Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.296748Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.296836Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.296992Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.297142Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.297298Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.297440Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298057Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298146Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298292Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298374Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298520Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298604Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298749Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298835Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.298987Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.299140Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.299823Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.299918Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300068Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300158Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300301Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300389Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300534Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300616Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300823Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.300997Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.301764Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.301854Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.301998Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.302084Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.303522Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.304240Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.304426Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.304523Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.304677Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.304765Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.304915Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.304999Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.305153Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.305332Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.306177Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.306274Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.306428Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.306532Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.306678Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.306763Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.306919Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.307007Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.307151Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.307283Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.308259Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.308348Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.308503Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.308592Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.308738Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.308828Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.309036Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.309130Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.309458Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.310363Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.310520Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.310687Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.310837Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.310943Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.311101Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.311192Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.313943Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.314903Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.315262Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.315350Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.330672Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.330887Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.332028Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.332124Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.332271Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.332669Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.332844Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.333068Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.333276Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.333650Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.334091Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.334343Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.335035Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.335278Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.335820Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.336199Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T17:56:06.336534Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T17:56:06.337633Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.338504Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.340791Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T17:56:06.344299Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T17:56:06.347265Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T17:56:06.351098Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T17:56:06.351962Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T17:56:06.354463Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T17:56:06.356239Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T17:56:06.357281Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T17:56:06.471223Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.471314Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.472570Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.473062Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:06.477113Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T17:56:06.477745Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T17:56:07.040270Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.041700Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.044471Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T17:56:07.105973Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.107359Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.110234Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T17:56:07.221752Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.223182Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.226123Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T17:56:07.287409Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.288823Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.291977Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T17:56:07.503410Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.504761Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.508202Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T17:56:07.669523Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.670957Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.673866Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T17:56:07.736387Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.737755Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.740859Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T17:56:07.902261Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.903669Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:07.907369Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T17:56:08.018542Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.019931Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.023287Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T17:56:08.184671Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.186072Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.189321Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T17:56:08.250504Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.251919Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.255082Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T17:56:08.466764Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.468138Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.470958Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T17:56:08.501773Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.501860Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.503017Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.503824Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.506900Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T17:56:08.508321Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T17:56:08.513371Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.514557Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.517144Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T17:56:08.578725Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.578804Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.580052Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.580688Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.583605Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T17:56:08.584754Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T17:56:08.695117Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.696399Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.699408Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T17:56:08.810772Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.812105Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.815349Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T17:56:08.926711Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.927991Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:08.931097Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T17:56:09.393154Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.394302Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.397846Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T17:56:09.509246Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.510516Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.513348Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T17:56:09.624983Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.625064Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.626213Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.626773Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.630423Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T17:56:09.631666Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T17:56:09.692810Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.692915Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.694061Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.694508Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:09.698301Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T17:56:09.699557Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T17:56:10.010030Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.011306Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.014599Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T17:56:10.075917Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.077175Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.080340Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T17:56:10.141733Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.142985Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.146401Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T17:56:10.207672Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.208917Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.212446Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T17:56:10.423933Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.425133Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.428398Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T17:56:10.539687Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.540887Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.544435Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T17:56:10.706238Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.707386Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.710154Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T17:56:10.715293Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.716375Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.719030Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T17:56:10.748670Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.749787Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.751812Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.752826Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T17:56:10.753356Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.755975Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T17:56:10.785659Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.786743Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.790019Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T17:56:10.851457Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.852996Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.854986Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.855974Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T17:56:10.856489Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.859570Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T17:56:10.921052Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.922160Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.925094Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T17:56:10.986368Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.987481Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:10.990245Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T17:56:11.051601Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.051713Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.052751Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.053225Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.056311Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T17:56:11.056934Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T17:56:11.117826Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.118901Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.121977Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T17:56:11.233385Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.234533Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.237413Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T17:56:11.299784Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.300817Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.304020Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T17:56:11.333183Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.334276Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.337144Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T17:56:11.398321Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.399395Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.402429Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T17:56:11.407333Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.408339Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.411242Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T17:56:11.440539Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.441924Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.442247Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.445425Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.445904Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T17:56:11.448633Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T17:56:11.910766Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.911875Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.914831Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T17:56:11.976266Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.977242Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:11.980440Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T17:56:12.493807Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.494761Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.497706Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T17:56:12.559016Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.560053Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.562937Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T17:56:12.624409Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.625411Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.628276Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T17:56:12.689707Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.690698Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.693846Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T17:56:12.805240Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.806215Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.809176Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T17:56:12.870420Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.871442Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.874271Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T17:56:12.936602Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.937591Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:12.940495Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T17:56:13.001909Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.001997Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.002928Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.003537Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.006750Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T17:56:13.319266Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.320253Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.323388Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T17:56:13.328243Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.329175Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.332289Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T17:56:13.361192Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.362130Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.365067Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T17:56:13.365898Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.366777Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.370079Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T17:56:13.399139Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.400069Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:13.403119Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T17:56:14.216212Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.217146Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.220531Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T17:56:14.234722Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.235622Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.238599Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T17:56:14.299691Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.299796Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.300662Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.301319Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.304914Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T17:56:14.306091Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T17:56:14.367699Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.367784Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.368618Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.369049Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.371901Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T17:56:14.372701Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T17:56:14.434338Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.434434Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.435236Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.435766Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.438999Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T17:56:14.439919Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T17:56:14.552014Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.552858Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.555682Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T17:56:14.617185Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.618038Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.621478Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T17:56:14.727964Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T17:56:14.732810Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.732894Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.733688Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.734245Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.736601Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T17:56:14.739086Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T17:56:14.768428Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.769212Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:14.772208Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T17:56:15.234352Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.235170Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.237929Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T17:56:15.251208Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.251981Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.254746Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T17:56:15.284189Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.285221Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.285697Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.287737Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.287894Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T17:56:15.290406Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T17:56:15.319932Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.320785Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.321231Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.322053Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.325568Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T17:56:15.326620Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T17:56:15.356061Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.356797Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.359653Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T17:56:15.421016Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.421111Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.422138Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.422644Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.423272Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.426312Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T17:56:15.427076Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.427572Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T17:56:15.430141Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T17:56:15.459333Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.459408Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.460109Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.460775Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.462547Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.463125Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T17:56:15.464680Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.465008Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T17:56:15.467569Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T17:56:15.480757Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.481454Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.484595Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T17:56:15.497628Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.497811Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.498693Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.499308Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.500930Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.501541Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T17:56:15.503089Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.503595Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T17:56:15.506133Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T17:56:15.519364Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.535318Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.567320Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.567964Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T17:56:15.570746Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T17:56:15.632149Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:16.097229Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:16.097907Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T17:56:16.101034Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T17:56:16.162273Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:16.226554Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:16.227228Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T17:56:16.230170Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T17:56:16.259344Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.025072Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.025685Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.028549Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T17:56:17.041595Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.042216Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.044921Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T17:56:17.058008Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.073903Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.077581Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.078106Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.080674Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T17:56:17.110671Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.111048Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.111189Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.111852Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.113716Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.113946Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T17:56:17.116978Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T17:56:17.117820Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T17:56:17.146594Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.146670Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.146696Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.146890Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.147384Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.149777Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T17:56:17.151070Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T17:56:17.180155Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.180212Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.180409Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T17:56:17.182844Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T17:56:17.212290Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T17:56:25.287055Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T17:56:39.396069Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T17:56:39.396069Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] 
[2026-05-27T17:56:39.396069Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T17:56:39.396128Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] 
[2026-05-27T17:56:39.396136Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T17:56:39.396144Z] [nf-fb76df9a45c7bae8051c8b51b6d5905e-62854-mkrh6] [567_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec