File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/680abbce68980750bb710d9216f8a4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d1sy8sb0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:55,430 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:56,264 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:56,435 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:57,393 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:57,582 - cnv_pipe.batch.run_model - INFO - Processing cluster 1069 with 91 probes
2026-05-27 18:54:57,960 - cnv_pipe.batch.run_model.cluster1069 - INFO - Child process started for cluster 1069 with 91 probes
2026-05-27 18:55:27,302 - cnv_pipe.batch.run_model.cluster1069 - INFO - Child process finished cluster 1069. Wrote cluster_1069_samples.csv and cluster_1069_params.csv
2026-05-27 18:55:27,303 - cnv_pipe.batch.run_model - INFO - Cluster 1069 finished in 29.72 seconds. Status: SUCCESS