[2026-05-27T18:50:04.566738Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T18:50:04.567203Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T18:50:04.567215Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T18:50:04.567219Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T18:50:04.567223Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX4OmHSi'
[2026-05-27T18:50:04.567226Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T18:50:04.567231Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T18:50:04.567236Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T18:50:04.567240Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] memMb: 386708
[2026-05-27T18:50:04.567244Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T18:50:04.567247Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T18:50:04.567252Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T18:50:04.567255Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T18:50:04.567260Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T18:50:04.568018Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T18:50:04.568126Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T18:50:04.573834Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T18:50:04.574516Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T18:50:04.574701Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T18:50:04.574848Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.575406Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.575511Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T18:50:04.576040Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_000_chr1_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.576209Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.576484Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.576972Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.577367Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.578922Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.579323Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.579641Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.579782Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T18:50:04.580041Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.580449Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.580584Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.580697Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.580762Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.580870Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.580933Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.581039Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.581100Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.581280Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.581343Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.581451Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.581515Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.581706Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.582158Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.582719Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.582794Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.582904Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0012' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.582967Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0012' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583078Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0013' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583174Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0013' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583286Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0014' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583345Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0014' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583455Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0015' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583520Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0015' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583628Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0016' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583691Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0016' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.583899Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0017' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.584273Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0017' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.584409Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0018' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.584471Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0018' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.584579Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0019' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.584643Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0019' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.585085Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0020' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.585148Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0020' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.585261Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.585384Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.585521Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.585739Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586224Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586287Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586393Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586453Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586562Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586623Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586732Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586794Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586900Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.586961Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.587070Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.587128Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.587256Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.587377Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.587752Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.588172Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.588283Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.588341Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.603408Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.603838Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.603907Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.604075Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.604141Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.604226Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.605418Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.605925Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.606538Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.607166Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T18:50:04.607434Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T18:50:04.607550Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.607952Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.608418Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.608904Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0014' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.609736Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.610841Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0012' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.611459Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.612686Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0017' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.617299Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0004] Task initiated on local node
[2026-05-27T18:50:04.623922Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0007] Task initiated on local node
[2026-05-27T18:50:04.624907Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0009] Task initiated on local node
[2026-05-27T18:50:04.628164Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0012] Task initiated on local node
[2026-05-27T18:50:04.632009Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-05-27T18:50:04.634345Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0017] Task initiated on local node
[2026-05-27T18:50:04.747363Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.748226Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:04.751784Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-05-27T18:50:05.364251Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.365133Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0019' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.367915Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0019] Task initiated on local node
[2026-05-27T18:50:06.231588Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.232417Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.235189Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0007] Task initiated on local node
[2026-05-27T18:50:06.251462Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0001] Task initiated on local node
[2026-05-27T18:50:06.264791Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.265681Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0012' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.269580Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0012] Task initiated on local node
[2026-05-27T18:50:06.298489Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.298619Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.299389Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.300022Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.303242Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-05-27T18:50:06.304376Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-05-27T18:50:06.365284Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.366037Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.368757Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0011] Task initiated on local node
[2026-05-27T18:50:06.480545Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.481404Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.484049Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0006] Task initiated on local node
[2026-05-27T18:50:06.646053Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.646877Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.649914Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0009] Task initiated on local node
[2026-05-27T18:50:06.711183Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.711993Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.714947Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-05-27T18:50:06.744336Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0017' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.745139Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0017' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.747834Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0017] Task initiated on local node
[2026-05-27T18:50:06.777366Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0017' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.777463Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.778145Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0016' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.778523Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.781560Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0004] Task initiated on local node
[2026-05-27T18:50:06.782387Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0016] Task initiated on local node
[2026-05-27T18:50:06.813157Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.813897Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.816436Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0005] Task initiated on local node
[2026-05-27T18:50:06.991271Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0014] Task initiated on local node
[2026-05-27T18:50:07.028503Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.028620Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.028646Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.028678Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.029427Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.030028Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.032040Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0014' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.033589Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-05-27T18:50:07.034792Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0011] Task initiated on local node
[2026-05-27T18:50:07.035305Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0013' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.036267Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0014] Task initiated on local node
[2026-05-27T18:50:07.038471Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0013] Task initiated on local node
[2026-05-27T18:50:07.067966Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.068048Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.068079Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.068755Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.069278Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.072613Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-05-27T18:50:07.073261Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.073762Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0002] Task initiated on local node
[2026-05-27T18:50:07.075924Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-05-27T18:50:07.105415Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.105487Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.106137Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.106797Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0020' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.109766Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-05-27T18:50:07.110474Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0020] Task initiated on local node
[2026-05-27T18:50:07.371425Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0019' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.372153Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.374938Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0003] Task initiated on local node
[2026-05-27T18:50:07.388269Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.388987Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.391593Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0006] Task initiated on local node
[2026-05-27T18:50:07.454647Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.455393Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.458392Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-05-27T18:50:07.519759Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.520485Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.523349Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-05-27T18:50:07.552683Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.553333Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.556128Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-05-27T18:50:07.818195Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.818896Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0019' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.821840Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0019] Task initiated on local node
[2026-05-27T18:50:07.852023Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0019' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.852690Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.855078Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-05-27T18:50:07.885964Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.886662Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0016' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.889367Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0016] Task initiated on local node
[2026-05-27T18:50:07.918864Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.919536Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0015' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.922339Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0015] Task initiated on local node
[2026-05-27T18:50:08.585226Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.585314Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.585962Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.586649Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.589919Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-05-27T18:50:08.590406Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-05-27T18:50:08.651046Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.651736Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.654672Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0001] Task initiated on local node
[2026-05-27T18:50:08.684087Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.684769Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0018' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.687500Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0018] Task initiated on local node
[2026-05-27T18:50:08.799356Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0020' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.800004Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.802635Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-05-27T18:50:08.864266Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.864909Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.867627Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0000] Task initiated on local node
[2026-05-27T18:50:09.079757Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.080428Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0013' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.083527Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0013] Task initiated on local node
[2026-05-27T18:50:09.112619Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.113241Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.115833Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0010] Task initiated on local node
[2026-05-27T18:50:09.277792Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.278443Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.281171Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-05-27T18:50:09.294764Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.295409Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.298306Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-05-27T18:50:09.311424Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.312161Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.314743Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0002] Task initiated on local node
[2026-05-27T18:50:09.344119Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.344688Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0020' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.347602Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0020] Task initiated on local node
[2026-05-27T18:50:09.352850Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.353355Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.355592Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-05-27T18:50:09.386257Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0020' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.386837Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.389492Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0008] Task initiated on local node
[2026-05-27T18:50:09.390668Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.391319Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.391706Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.392652Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0015' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.395274Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-05-27T18:50:09.396097Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0015] Task initiated on local node
[2026-05-27T18:50:09.425452Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.425988Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.428504Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-05-27T18:50:09.490233Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.490787Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.493655Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-05-27T18:50:09.523039Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.523583Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.526374Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0005] Task initiated on local node
[2026-05-27T18:50:09.555658Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.559371Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.559810Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.562372Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0010] Task initiated on local node
[2026-05-27T18:50:09.592031Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.756490Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.756991Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.759796Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0003] Task initiated on local node
[2026-05-27T18:50:09.789018Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.053612Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0018' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.054092Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0018' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.056398Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0018] Task initiated on local node
[2026-05-27T18:50:10.087252Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0018' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.251723Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.252167Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.254643Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0008] Task initiated on local node
[2026-05-27T18:50:10.284348Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.448942Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.449403Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.451658Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-05-27T18:50:10.481571Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.489230Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.489617Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.491717Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-05-27T18:50:10.521596Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.685839Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.686313Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_000_chr1_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.689014Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_000_chr1_0000] Task initiated on local node
[2026-05-27T18:50:10.750637Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_000_chr1_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.751107Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.753426Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0000] Task initiated on local node
[2026-05-27T18:50:10.816150Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.816420Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.816556Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.817255Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.818714Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.819278Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T18:50:10.821942Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T18:50:10.822965Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T18:50:10.852573Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.852642Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.852667Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.852865Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.854246Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.854835Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T18:50:10.856336Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T18:50:10.886053Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.886120Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.886302Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.888833Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T18:50:10.918262Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:15.190298Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T18:50:23.456224Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T18:50:23.456224Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] 
[2026-05-27T18:50:23.456224Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T18:50:23.456287Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] 
[2026-05-27T18:50:23.456294Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T18:50:23.456301Z] [nf-b13b30db30c73351268bee75e63f707a-115e1-5zgkh] [615_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec