File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/48c545d8e5ec0d139807154074f1c5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0o9dqe0b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:21,243 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:22,045 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:22,215 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:23,179 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:23,358 - cnv_pipe.batch.run_model - INFO - Processing cluster 864 with 189 probes
2026-05-27 18:54:23,736 - cnv_pipe.batch.run_model.cluster864 - INFO - Child process started for cluster 864 with 189 probes
2026-05-27 18:55:18,197 - cnv_pipe.batch.run_model.cluster864 - INFO - Child process finished cluster 864. Wrote cluster_864_samples.csv and cluster_864_params.csv
2026-05-27 18:55:18,198 - cnv_pipe.batch.run_model - INFO - Cluster 864 finished in 54.84 seconds. Status: SUCCESS