File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/a287c025ad2eb612bdaf71fc6f7d42/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-22ia2k3m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:55:07,710 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:55:08,585 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:55:08,757 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:55:09,674 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:55:09,847 - cnv_pipe.batch.run_model - INFO - Processing cluster 1145 with 167 probes
2026-05-27 18:55:10,233 - cnv_pipe.batch.run_model.cluster1145 - INFO - Child process started for cluster 1145 with 167 probes
2026-05-27 18:55:59,847 - cnv_pipe.batch.run_model.cluster1145 - INFO - Child process finished cluster 1145. Wrote cluster_1145_samples.csv and cluster_1145_params.csv
2026-05-27 18:55:59,848 - cnv_pipe.batch.run_model - INFO - Cluster 1145 finished in 50.00 seconds. Status: SUCCESS