File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/cf84d68bc832dc8533a27f7cfa705f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wjm2y_kk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:25,297 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:26,093 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:26,265 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:27,179 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:27,256 - cnv_pipe.batch.run_model - INFO - Processing cluster 890 with 172 probes
2026-05-27 18:54:27,739 - cnv_pipe.batch.run_model.cluster890 - INFO - Child process started for cluster 890 with 172 probes
2026-05-27 18:55:18,587 - cnv_pipe.batch.run_model.cluster890 - INFO - Child process finished cluster 890. Wrote cluster_890_samples.csv and cluster_890_params.csv
2026-05-27 18:55:18,588 - cnv_pipe.batch.run_model - INFO - Cluster 890 finished in 51.33 seconds. Status: SUCCESS