File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fa/6b7a3e482b727f9fe613de65c68eb3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-on7145h2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:17,499 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:18,352 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:18,527 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:19,525 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:19,709 - cnv_pipe.batch.run_model - INFO - Processing cluster 843 with 182 probes
2026-05-27 18:54:20,095 - cnv_pipe.batch.run_model.cluster843 - INFO - Child process started for cluster 843 with 182 probes
2026-05-27 18:55:14,184 - cnv_pipe.batch.run_model.cluster843 - INFO - Child process finished cluster 843. Wrote cluster_843_samples.csv and cluster_843_params.csv
2026-05-27 18:55:14,185 - cnv_pipe.batch.run_model - INFO - Cluster 843 finished in 54.48 seconds. Status: SUCCESS