File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c9/9d1496f6d5555ceb875450e5926ac9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cxpmk_jb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:54,344 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:55,145 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:55,315 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:56,239 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:56,407 - cnv_pipe.batch.run_model - INFO - Processing cluster 1068 with 199 probes
2026-05-27 18:54:56,784 - cnv_pipe.batch.run_model.cluster1068 - INFO - Child process started for cluster 1068 with 199 probes
2026-05-27 18:55:56,278 - cnv_pipe.batch.run_model.cluster1068 - INFO - Child process finished cluster 1068. Wrote cluster_1068_samples.csv and cluster_1068_params.csv
2026-05-27 18:55:56,279 - cnv_pipe.batch.run_model - INFO - Cluster 1068 finished in 59.87 seconds. Status: SUCCESS