File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/31ff7beb420d2f6fb7afbebb7f2107/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-slw9c9x_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:10,014 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:10,834 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:11,008 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:11,982 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:12,168 - cnv_pipe.batch.run_model - INFO - Processing cluster 800 with 199 probes
2026-05-27 18:54:12,554 - cnv_pipe.batch.run_model.cluster800 - INFO - Child process started for cluster 800 with 199 probes
2026-05-27 18:55:10,793 - cnv_pipe.batch.run_model.cluster800 - INFO - Child process finished cluster 800. Wrote cluster_800_samples.csv and cluster_800_params.csv
2026-05-27 18:55:10,795 - cnv_pipe.batch.run_model - INFO - Cluster 800 finished in 58.63 seconds. Status: SUCCESS